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While image-text representation learning has become very popular in recent years, existing models tend to lack spatial awareness and have limited direct applicability for dense understanding tasks. For this reason, self-supervised…

Understanding how the brain encodes external stimuli and how these stimuli can be decoded from the measured brain activities are long-standing and challenging questions in neuroscience. In this paper, we focus on reconstructing the complex…

Neurons and Cognition · Quantitative Biology 2022-10-05 Sikun Lin , Thomas Sprague , Ambuj K Singh

Deciphering language from brain activity is a crucial task in brain-computer interface (BCI) research. Non-invasive cerebral signaling techniques including electroencephalography (EEG) and magnetoencephalography (MEG) are becoming…

Computation and Language · Computer Science 2025-12-29 Yiqian Yang , Hyejeong Jo , Yiqun Duan , Qiang Zhang , Jinni Zhou , Xuming Hu , Won Hee Lee , Renjing Xu , Hui Xiong

In this work, we develop intuitive controls for editing the style of 3D objects. Our framework, Text2Mesh, stylizes a 3D mesh by predicting color and local geometric details which conform to a target text prompt. We consider a disentangled…

Computer Vision and Pattern Recognition · Computer Science 2021-12-07 Oscar Michel , Roi Bar-On , Richard Liu , Sagie Benaim , Rana Hanocka

This paper presents a comprehensive and quality collection of functional human brain network data for potential research in the intersection of neuroscience, machine learning, and graph analytics. Anatomical and functional MRI images have…

Many analysis and prediction tasks require the extraction of structured data from unstructured texts. However, an annotation scheme and a training dataset have not been available for training machine learning models to mine structured data…

Information Retrieval · Computer Science 2025-06-24 Chaochao Zhou , Bo Yang

The human brain is a complex system requiring both macroscopic and microscopic components for comprehensive understanding. However, mapping nonlinear relationships between these scales remains challenging due to technical limitations and…

Image and Video Processing · Electrical Eng. & Systems 2025-10-28 Sooyoung Kim , Joonwoo Kwon , Junbeom Kwon , Jungyoun Janice Min , Sangyoon Bae , Yuewei Lin , Shinjae Yoo , Jiook Cha

Brain decoding is a field of computational neuroscience that uses measurable brain activity to infer mental states or internal representations of perceptual inputs. Therefore, we propose a novel approach to brain decoding that also relies…

Computer Vision and Pattern Recognition · Computer Science 2023-03-23 Matteo Ferrante , Tommaso Boccato , Nicola Toschi

The exponential growth of neuroscience literature presents a significant challenge for researchers seeking to efficiently access and utilize relevant information. To address this issue, we introduce the Brain Knowledge Engine (BrainKnow),…

Digital Libraries · Computer Science 2024-06-07 Cunqing Huangfu , Kang Sun , Yi Zeng , Yuwei Wang , Dongsheng Wang , Zizhe Ruan

Modeling human-human interactions from text remains challenging because it requires not only realistic individual dynamics but also precise, text-consistent spatiotemporal coupling between agents. Currently, progress is hindered by 1)…

Computer Vision and Pattern Recognition · Computer Science 2025-10-09 Qingxuan Wu , Zhiyang Dou , Chuan Guo , Yiming Huang , Qiao Feng , Bing Zhou , Jian Wang , Lingjie Liu

Reconstructing natural speech from neural activity is vital for enabling direct communication via brain-computer interfaces. Previous efforts have explored the conversion of neural recordings into speech using complex deep neural network…

Sound · Computer Science 2024-02-01 Jiawei Li , Chunxu Guo , Li Fu , Lu Fan , Edward F. Chang , Yuanning Li

Understanding how spontaneous brain activity relates to stimulus-driven neural responses is a fundamental challenge in cognitive neuroscience. While task-based functional magnetic resonance imaging (fMRI) captures localized stimulus-evoked…

Neurons and Cognition · Quantitative Biology 2025-09-18 Chuyang Zhou , Ziao Ji , Daochang Liu , Dongang Wang , Chenyu Wang , Chang Xu

Functional magnetic resonance imaging (fMRI) has been increasingly employed to investigate functional brain activity. Many fMRI-related software/toolboxes have been developed, providing specialized algorithms for fMRI analysis. However,…

Image and Video Processing · Electrical Eng. & Systems 2024-05-13 Yuqi Fang , Junhao Zhang , Linmin Wang , Qianqian Wang , Mingxia Liu

Brain networks characterize complex connectivities among brain regions as graph structures, which provide a powerful means to study brain connectomes. In recent years, graph neural networks have emerged as a prevalent paradigm of learning…

Machine Learning · Computer Science 2022-06-10 Yi Yang , Yanqiao Zhu , Hejie Cui , Xuan Kan , Lifang He , Ying Guo , Carl Yang

In this work we design a narrative understanding tool Text2ALM. This tool uses an action language ALM to perform inferences on complex interactions of events described in narratives. The methodology used to implement the Text2ALM system was…

Artificial Intelligence · Computer Science 2019-09-19 Craig Olson , Yuliya Lierler

Automated analysis of imaged phenotypes enables fast and reproducible quantification of biologically relevant features. Despite recent developments, recordings of complex, networked structures, such as: leaf venation patterns, cytoskeletal…

Quantitative Methods · Quantitative Biology 2017-06-01 David Breuer , Zoran Nikoloski

Modern neuroprostheses can now restore communication in patients who have lost the ability to speak or move. However, these invasive devices entail risks inherent to neurosurgery. Here, we introduce a non-invasive method to decode the…

Signal Processing · Electrical Eng. & Systems 2025-02-26 Jarod Lévy , Mingfang Zhang , Svetlana Pinet , Jérémy Rapin , Hubert Banville , Stéphane d'Ascoli , Jean-Rémi King

While functional magnetic resonance imaging (fMRI) offers valuable insights into brain activity, it is limited by high operational costs and significant infrastructural demands. In contrast, electroencephalography (EEG) provides…

Computer Vision and Pattern Recognition · Computer Science 2025-04-29 Kristofer Grover Roos , Atsushi Fukuda , Quan Huu Cap

Creating tetrahedral meshes with anatomically accurate surfaces is critically important for a wide range of model-based neuroimaging modalities. However, computationally efficient brain meshing algorithms and software are greatly lacking.…

Medical Physics · Physics 2017-08-31 Anh Phong Tran , Qianqian Fang

The synthesis of high-resolution remote sensing images based on text descriptions has great potential in many practical application scenarios. Although deep neural networks have achieved great success in many important remote sensing tasks,…

Computer Vision and Pattern Recognition · Computer Science 2023-10-26 Yonghao Xu , Weikang Yu , Pedram Ghamisi , Michael Kopp , Sepp Hochreiter