Related papers: Grid homology for spatial graphs and a skein exact…
We extend the theory of combinatorial link Floer homology to a class of oriented spatial graphs called transverse spatial graphs. To do this, we define the notion of a grid diagram representing a transverse spatial graph, which we call a…
We re-derive Manolescu's unoriented skein exact triangle for knot Floer homology over F_2 combinatorially using grid diagrams, and extend it to the case with Z coefficients by sign refinements. Iteration of the triangle gives a cube of…
We showed that the order of torsion homology classes in the grid homology of a knot is a lower bound for the unknotting number.
In this paper we introduce various associative products on the homology of the space of knots and singular knots in $S^n$. We prove that these products are related through a desingularization map. We also compute some of these products and…
Khovanov homology for knots has generated a flurry of activity in the topology community. This paper studies the Khovanov type cohomology for graphs with a special attention to torsions. When the underlying algebra is $\mathbb{Z}[x]/(x^2)$,…
We propose a new method of computing cohomology groups of spaces of knots in $\R^n$, $n \ge 3$, based on the topology of configuration spaces and two-connected graphs, and calculate all such classes of order $\le 3.$ As a byproduct we…
We partially determine grid homology (combinatorial knot Floer homology) of diagonal knots, which are conjectured to be equivalent to positive braid knots, by exploiting nice grid diagrams. Its next-to-top term detects the number of prime…
Link prediction is an important learning task for graph-structured data. In this paper, we propose a novel topological approach to characterize interactions between two nodes. Our topological feature, based on the extended persistent…
A discussion given to the question of extending Khovanov homology from links to embedded graphs, by using the Kauffman topological invariant of embedded graphs by associating family of links and knots to a such graph by using some local…
We uncover a connection between two seemingly unrelated notions: lettericity, from structural graph theory, and geometric griddability, from the world of permutation patterns. Both of these notions capture important structural properties of…
We present a combinatorial proof for the existence of the sign refined grid homology in lens spaces, and a self contained proof that $\partial_{\mathbb{Z}}^2 = 0$. We also present a Sage program that computes $\widehat{\mathrm{GH}}…
Persistent homology, a technique from computational topology, has recently shown strong empirical performance in the context of graph classification. Being able to capture long range graph properties via higher-order topological features,…
Following the approach to grid homology of links in $S^3$, we prove combinatorially that the grid homology of links in lens spaces defined by Baker, Grigsby, and Hedden is a link invariant. Further, using the sign assignment defined by…
Directed graphs can be studied by their associated directed flag complex. The homology of this complex has been successful in applications as a topological invariant for digraphs. Through comparison with path homology theory, we derive a…
In the paper we prove that the primitive part of the Sinha homology spectral sequence E^2-term for the space of long knots is rationally isomorphic to the homotopy E^2-term. We also define natural graph-complexes computing the rational…
The matching complex of a graph $G$ is a simplicial complex whose simplices are matchings in $G$. In the last few years the matching complexes of grid graphs have gained much attention among the topological combinatorists. In 2017, Braun…
In this note, we outline the general development of a theory of symmetric homology of algebras, an analog of cyclic homology where the cyclic groups are replaced by symmetric groups. This theory is developed using the framework of crossed…
By defining grids as graphs, geometric graphs can be represented in a very concise way.
We review Heisenberg homology of configurations in once bounded surfaces and extend the construction to the regular thickening of a finite graph with ribbon structure.
We extend the notion of intersection graphs for knots in the theory of finite type invariants to string links. We use our definition to develop weight systems for string links via the adjacency matrix of the intersection graph, and show…