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With the rapidly increasing amount of scientific literature,it is getting continuously more difficult for researchers in different disciplines to be updated with the recent findings in their field of study.Processing scientific articles in…

Digital Libraries · Computer Science 2022-03-04 Cristina-Iulia Bucur , Tobias Kuhn , Davide Ceolin , Jacco van Ossenbruggen

The semantic web has received many contributions of researchers as ontologies which, in this context, i.e. within RDF linked data, are formalized conceptualizations that might use different protocols, such as RDFS, OWL DL and OWL FULL. In…

Artificial Intelligence · Computer Science 2017-10-30 Renato Fabbri

Rather than using text for scientific research reports, we have proposed developing highly-structured reports with rich semantic models. In this paper, we consider detailed structures for the components of research reports using a modeling…

Digital Libraries · Computer Science 2017-08-29 Robert B. Allen

Scientific communication still mainly relies on natural language written in scientific papers, which makes the described knowledge very difficult to access with automatic means. We can therefore only make limited use of formal knowledge…

Digital Libraries · Computer Science 2018-06-06 Tobias Kuhn

Semantic knowledge graphs are foundational to implementing the FAIR Principles, yet RDF/OWL representations often lack the semantic flexibility and cognitive interoperability required in scientific domains. We present a novel framework for…

Databases · Computer Science 2025-06-09 Lars Vogt

The Micropublications semantic model for scientific claims, evidence, argumentation and annotation in biomedical publications, is a metadata model of scientific argumentation, designed to support several key requirements for exchange and…

Digital Libraries · Computer Science 2014-02-04 Tim Clark , Paolo N. Ciccarese , Carole A. Goble

This paper presents a new system of logic, LF, that is intended to be used as the foundation of the formalization of science. That is, deductive validity according to LF is to be used as the criterion for assessing what follows from the…

Logic · Mathematics 2024-01-23 Zachary Goodsell , Juhani Yli-Vakkuri

Ontologies are used in various domains, with RDF and OWL being prominent standards for ontology development. RDF is favored for its simplicity and flexibility, while OWL enables detailed domain knowledge representation. However, as…

Artificial Intelligence · Computer Science 2023-08-10 Gunjan Singh , Sumit Bhatia , Raghava Mutharaju

One relevant aspect in the development of the Semantic Web framework is the achievement of a real inter-agents communication capability at the semantic level. The agents should be able to communicate and understand each other using standard…

Multiagent Systems · Computer Science 2024-01-23 Idoia Berges , Jesús Bermúdez , Alfredo Goñi , Arantza Illarramendi

Scientific Large Language Models (Sci-LLMs) are transforming how knowledge is represented, integrated, and applied in scientific research, yet their progress is shaped by the complex nature of scientific data. This survey presents a…

Computation and Language · Computer Science 2025-10-21 Ming Hu , Chenglong Ma , Wei Li , Wanghan Xu , Jiamin Wu , Jucheng Hu , Tianbin Li , Guohang Zhuang , Jiaqi Liu , Yingzhou Lu , Ying Chen , Chaoyang Zhang , Cheng Tan , Jie Ying , Guocheng Wu , Shujian Gao , Pengcheng Chen , Jiashi Lin , Haitao Wu , Lulu Chen , Fengxiang Wang , Yuanyuan Zhang , Xiangyu Zhao , Feilong Tang , Encheng Su , Junzhi Ning , Xinyao Liu , Ye Du , Changkai Ji , Pengfei Jiang , Cheng Tang , Ziyan Huang , Jiyao Liu , Jiaqi Wei , Yuejin Yang , Xiang Zhang , Guangshuai Wang , Yue Yang , Huihui Xu , Ziyang Chen , Yizhou Wang , Chen Tang , Jianyu Wu , Yuchen Ren , Siyuan Yan , Zhonghua Wang , Zhongxing Xu , Shiyan Su , Shangquan Sun , Runkai Zhao , Zhisheng Zhang , Dingkang Yang , Jinjie Wei , Jiaqi Wang , Jiahao Xu , Jiangtao Yan , Wenhao Tang , Hongze Zhu , Yu Liu , Fudi Wang , Yiqing Shen , Yuanfeng Ji , Yanzhou Su , Tong Xie , Hongming Shan , Chun-Mei Feng , Zhi Hou , Diping Song , Lihao Liu , Yanyan Huang , Lequan Yu , Bin Fu , Shujun Wang , Xiaomeng Li , Xiaowei Hu , Yun Gu , Ben Fei , Benyou Wang , Yuewen Cao , Minjie Shen , Jie Xu , Haodong Duan , Fang Yan , Hongxia Hao , Jielan Li , Jiajun Du , Yanbo Wang , Imran Razzak , Zhongying Deng , Chi Zhang , Lijun Wu , Conghui He , Zhaohui Lu , Jinhai Huang , Wenqi Shao , Yihao Liu , Siqi Luo , Yi Xin , Xiaohong Liu , Fenghua Ling , Yuqiang Li , Aoran Wang , Siqi Sun , Qihao Zheng , Nanqing Dong , Tianfan Fu , Dongzhan Zhou , Yan Lu , Wenlong Zhang , Jin Ye , Jianfei Cai , Yirong Chen , Wanli Ouyang , Yu Qiao , Zongyuan Ge , Shixiang Tang , Junjun He , Chunfeng Song , Lei Bai , Bowen Zhou

The application range of nanopublications --- small entities of scientific results in RDF representation --- could be greatly extended if complete formal representations are not mandatory. To that aim, we present an approach to represent…

Digital Libraries · Computer Science 2013-01-21 Tobias Kuhn , Michael Krauthammer

OWL 2 has been standardized by the World Wide Web Consortium (W3C) as a family of ontology languages for the Semantic Web. The most expressive of these languages is OWL 2 Full, but to date no reasoner has been implemented for this language.…

Artificial Intelligence · Computer Science 2011-08-02 Michael Schneider , Geoff Sutcliffe

The ability of Large Language Models (LLMs) to perform reasoning tasks such as deduction has been widely investigated in recent years. Yet, their capacity to generate proofs-faithful, human-readable explanations of why conclusions…

Artificial Intelligence · Computer Science 2026-01-21 Hui Yang , Jiaoyan Chen , Uli Sattler

We propose a new method for mining frequent patterns in a language that combines both Semantic Web ontologies and rules. In particular we consider the setting of using a language that combines description logics with DL-safe rules. This…

Logic in Computer Science · Computer Science 2015-03-13 Joanna Jozefowska , Agnieszka Lawrynowicz , Tomasz Lukaszewski

This paper presents our work on development of OWL-driven systems for formal representation and reasoning about terminological knowledge and facts in petrology. The long-term aim of our project is to provide solid foundations for a…

Artificial Intelligence · Computer Science 2011-06-09 Alex Shkotin , Vladimir Ryakhovsky , Dmitry Kudryavtsev

With the expansion of scientific research, the number of scientific research is increasing. A new urgent problem is raised that how to keep these researches in a proper way. Therefore, knowledge mapping methods come into being, providing a…

Digital Libraries · Computer Science 2022-02-22 Fan Shen

Semantic Web knowledge representation standards, and in particular RDF and OWL, often come endowed with a formal semantics which is considered to be of fundamental importance for the field. Reasoning, i.e., the drawing of logical inferences…

Machine Learning · Computer Science 2018-11-13 Monireh Ebrahimi , Md Kamruzzaman Sarker , Federico Bianchi , Ning Xie , Derek Doran , Pascal Hitzler

Many systems can be described in terms of networks of discrete elements and their various relationships to one another. A semantic network, or multi-relational network, is a directed labeled graph consisting of a heterogeneous set of…

Artificial Intelligence · Computer Science 2008-11-03 Marko A. Rodriguez , Jennifer H. Watkins , Johan Bollen , Carlos Gershenson

Scientific information expresses human understanding of nature. This knowledge is largely disseminated in different forms of text, including scientific papers, news articles, and discourse among people on social media. While important for…

Computation and Language · Computer Science 2025-07-01 Dustin Wright

The rise of automated code generation tools, such as large language models (LLMs), has introduced new challenges in ensuring the correctness and efficiency of scientific software, particularly in complex kernels, where numerical stability,…

Programming Languages · Computer Science 2025-01-17 Naifeng Zhang , Sanil Rao , Mike Franusich , Franz Franchetti
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