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In the past two decades, significant advances have been made in understanding the structural and functional properties of biological networks, via graph-theoretic analysis. In general, most graph-theoretic studies are conducted in the…

Physics and Society · Physics 2013-10-21 Michelle Rudolph-Lilith , Lyle E. Muller

Positional reasoning is the process of ordering unsorted parts contained in a set into a consistent structure. We present Positional Diffusion, a plug-and-play graph formulation with Diffusion Probabilistic Models to address positional…

Computer Vision and Pattern Recognition · Computer Science 2023-03-21 Francesco Giuliari , Gianluca Scarpellini , Stuart James , Yiming Wang , Alessio Del Bue

Graph classes of bounded tree rank were introduced recently in the context of the model checking problem for first-order logic of graphs. These graph classes are a common generalization of graph classes of bounded degree and bounded…

Discrete Mathematics · Computer Science 2025-10-08 Jakub Gajarský , Rose McCarty

Although the ``scale-free'' literature is large and growing, it gives neither a precise definition of scale-free graphs nor rigorous proofs of many of their claimed properties. In fact, it is easily shown that the existing theory has many…

Disordered Systems and Neural Networks · Physics 2007-05-23 Lun Li , David Alderson , Reiko Tanaka , John C. Doyle , Walter Willinger

Hierarchy is one of the most conspicuous features of numerous natural, technological and social systems. The underlying structures are typically complex and their most relevant organizational principle is the ordering of the ties among the…

Physics and Society · Physics 2014-03-05 Tamás Nepusz , Tamás Vicsek

We propose two toy-models to describe, predict, and interpret the wrinkles appearing on the surface of skin when it is sheared. With the first model, we account for the lines of greatest tension present in human skin by subjecting a layer…

Soft Condensed Matter · Physics 2013-06-04 Pasquale Ciarletta , Michel Destrade , Artur L. Gower

This paper discusses the formalization of proofs "by diagram chasing", a standard technique for proving properties in abelian categories. We discuss how the essence of diagram chases can be captured by a simple many-sorted first-order…

Logic in Computer Science · Computer Science 2023-11-29 Assia Mahboubi , Matthieu Piquerez

Degree distribution, or equivalently called degree sequence, has been commonly used to be one of most significant measures for studying a large number of complex networks with which some well-known results have been obtained. By contrast,…

Physics and Society · Physics 2020-02-19 Fei Ma , Xiaoming Wang , Ping Wang

While gradient descent has proven highly successful in learning connection weights for neural networks, the actual structure of these networks is usually determined by hand, or by other optimization algorithms. Here we describe a simple…

Neural and Evolutionary Computing · Computer Science 2016-08-09 Thomas Miconi

The presence of hierarchy in many real-world networks is not yet fully explained. Complex interaction networks are often coarse-grain models of vast modular networks, where tightly connected subgraphs are agglomerated into nodes for…

Physics and Society · Physics 2021-02-24 C. Tyler Diggans , Jeremie Fish , Erik Bollt

In the course of studies of the measure of chaos for the distribution of the prime numbers among the positive integers N arched structures have been found. It is given a brief description of the fine structure of the positive integers…

General Mathematics · Mathematics 2007-05-23 Andrei V. Vityazev , Galina V. Pechernikova

We study the number of random records in an arbitrary split tree (or equivalently, the number of random cuttings required to eliminate the tree). We show that a classical limit theorem for convergence of sums of triangular arrays to…

Probability · Mathematics 2010-05-26 Cecilia Holmgren

Schreier graphs, which possess both a graph structure and a Schreier structure (an edge-labeling by the generators of a group), are objects of fundamental importance in group theory and geometry. We study the Schreier structures with which…

Dynamical Systems · Mathematics 2014-06-02 Jan Cannizzo

We introduce a new model of indeterminacy in graphs: instead of specifying all the edges of the graph, the input contains all triples of vertices that form a connected subgraph. In general, different (labelled) graphs may have the same set…

Discrete Mathematics · Computer Science 2023-03-14 Paul Bastide , Linda Cook , Jeff Erickson , Carla Groenland , Marc van Kreveld , Isja Mannens , Jordi L. Vermeulen

We define a statistical ensemble of non-degenerate graphs, i.e. graphs without multiple- and self-connections between nodes. The node degree distribution is arbitrary, but the nodes are assumed to be uncorrelated. This completes our earlier…

Statistical Mechanics · Physics 2009-11-07 Z. Burda , A. Krzywicki

The occurence of shear bands in a complex fluid is generally understood as resulting from a structural evolution of the material under shear, which leads (from a theoretical perspective) to a non-monotonic stationnary flow curve related to…

Soft Condensed Matter · Physics 2012-06-22 Sylvain Bénito , François Molino , Charles-Henri Bruneau , Thierry Colin , Cyprien Gay

There is an interplay between models, specified by variables and equations, and their connections to one another. This dichotomy should be reflected in the abstract as well. Without referring to the models directly -- only that a model…

Algebraic Topology · Mathematics 2016-11-04 Michael Robinson

Many applications such as election forecasting, environmental monitoring, health policy, and graph based machine learning require taking expectation of functions defined on the vertices of a graph. We describe a construction of a sampling…

Machine Learning · Computer Science 2021-06-09 A. Cloninger , H. N. Mhaskar

Working with tree graphs is always easier than with loopy ones and spanning trees are the closest tree-like structures to a given graph. We find a correspondence between the solutions of random K-satisfiability problem and those of spanning…

Disordered Systems and Neural Networks · Physics 2009-11-11 A. Ramezanpour , S. Moghimi-Araghi

In this monography, it is proposed to consider the concepts of spectra of edge cuts and edge cycles of a graph as a basic mathematical structure for solving the problem of graph isomorphism. An edge cut is defined by an edge and the…

Combinatorics · Mathematics 2024-06-13 Sergey Kurapov , Maxim Davidovsky
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