English
Related papers

Related papers: Neural Distance Embeddings for Biological Sequence…

200 papers

Learning embeddings of entities and relations existing in knowledge bases allows the discovery of hidden patterns in data. In this work, we examine the geometrical space's contribution to the task of knowledge base completion. We focus on…

Computation and Language · Computer Science 2019-08-20 Prodromos Kolyvakis , Alexandros Kalousis , Dimitris Kiritsis

Contemporary machine learning models, including large language models, exhibit remarkable capabilities in static tasks yet falter in non-stationary environments due to rigid architectures that hinder continual adaptation and lifelong…

Machine Learning · Computer Science 2026-05-15 Akbar Anbar Jafari , Cagri Ozcinar , Gholamreza Anbarjafari

In contrast to regular (simple) networks, hyper networks possess the ability to depict more complex relationships among nodes and store extensive information. Such networks are commonly found in real-world applications, such as in social…

Social and Information Networks · Computer Science 2023-11-08 Shu Liu , Cameron Lai , Fujio Toriumi

In this paper, we propose a deep convolutional neural network for learning the embeddings of images in order to capture the notion of visual similarity. We present a deep siamese architecture that when trained on positive and negative pairs…

Computer Vision and Pattern Recognition · Computer Science 2019-01-14 Rishab Sharma , Anirudha Vishvakarma

Taxonomies are valuable resources for many applications, but the limited coverage due to the expensive manual curation process hinders their general applicability. Prior works attempt to automatically expand existing taxonomies to improve…

Computation and Language · Computer Science 2021-09-23 Mingyu Derek Ma , Muhao Chen , Te-Lin Wu , Nanyun Peng

Electroencephalography (EEG) foundation models hold significant promise for universal Brain-Computer Interfaces (BCIs). However, existing approaches often rely on end-to-end fine-tuning and exhibit limited efficacy under frozen-probing…

Machine Learning · Computer Science 2026-03-20 Jiquan Wang , Sha Zhao , Yangxuan Zhou , Yiming Kang , Shijian Li , Gang Pan

The need to understand the structure of hierarchical or high-dimensional data is present in a variety of fields. Hyperbolic spaces have proven to be an important tool for embedding computations and analysis tasks as their non-linear nature…

Human-Computer Interaction · Computer Science 2024-01-26 Martin Skrodzki , Hunter van Geffen , Nicolas F. Chaves-de-Plaza , Thomas Höllt , Elmar Eisemann , Klaus Hildebrandt

The problem of identifying geometric structure in heterogeneous, high-dimensional data is a cornerstone of representation learning. While there exists a large body of literature on the embeddability of canonical graphs, such as lattices or…

Machine Learning · Computer Science 2019-10-15 Melanie Weber

A network embedding is a representation of a large graph in a low-dimensional space, where vertices are modeled as vectors. The objective of a good embedding is to preserve the proximity between vertices in the original graph. This way,…

Artificial Intelligence · Computer Science 2017-01-20 Zhipeng Huang , Nikos Mamoulis

Networks found in the real-world are numerous and varied. A common type of network is the heterogeneous network, where the nodes (and edges) can be of different types. Accordingly, there have been efforts at learning representations of…

Social and Information Networks · Computer Science 2021-06-21 Lili Wang , Chongyang Gao , Chenghan Huang , Ruibo Liu , Weicheng Ma , Soroush Vosoughi

There is a recent surge of interest in cross-modal representation learning corresponding to images and text. The main challenge lies in mapping images and text to a shared latent space where the embeddings corresponding to a similar…

Computer Vision and Pattern Recognition · Computer Science 2019-11-15 Pradyumna Narayana , Aniket Pednekar , Abishek Krishnamoorthy , Kazoo Sone , Sugato Basu

Text similarity calculation is a fundamental problem in natural language processing and related fields. In recent years, deep neural networks have been developed to perform the task and high performances have been achieved. The neural…

Computation and Language · Computer Science 2018-10-26 Yilin Niu , Chao Qiao , Hang Li , Minlie Huang

Gene annotation has traditionally required direct comparison of DNA sequences between an unknown gene and a database of known ones using string comparison methods. However, these methods do not provide useful information when a gene does…

Machine Learning · Computer Science 2019-09-17 James K. Senter , Taylor M. Royalty , Andrew D. Steen , Amir Sadovnik

Finding suitable embeddings for connectomes (spatially embedded complex networks that map neural connections in the brain) is crucial for analyzing and understanding cognitive processes. Recent studies have found two-dimensional hyperbolic…

Neurons and Cognition · Quantitative Biology 2024-07-24 Dorota Celińska-Kopczyńska , Eryk Kopczyński

Hyperbolic space is quickly gaining traction as a promising geometry for hierarchical and robust representation learning. A core open challenge is the development of a mathematical formulation of hyperbolic neural networks that is both…

Machine Learning · Computer Science 2026-01-30 Robert van der Klis , Ricardo Chávez Torres , Max van Spengler , Yuhui Ding , Thomas Hofmann , Pascal Mettes

Neuroevolution is a promising area of research that combines evolutionary algorithms with neural networks. A popular subclass of neuroevolutionary methods, called evolution strategies, relies on dense noise perturbations to mutate networks,…

Neural and Evolutionary Computing · Computer Science 2023-02-14 Tim Whitaker , Darrell Whitley

Variational mean field approximations tend to struggle with contemporary overparametrized deep neural networks. Where a Bayesian treatment is usually associated with high-quality predictions and uncertainties, the practical reality has been…

A graph embedding is a representation of graph vertices in a low-dimensional space, which approximately preserves properties such as distances between nodes. Vertex sequence-based embedding procedures use features extracted from linear…

Machine Learning · Computer Science 2020-01-22 Benedek Rozemberczki , Rik Sarkar

In recent years, network embedding methods have garnered increasing attention because of their effectiveness in various information retrieval tasks. The goal is to learn low-dimensional representations of vertexes in an information network…

Social and Information Networks · Computer Science 2017-11-02 Chih-Ming Chen , Yi-Hsuan Yang , Yian Chen , Ming-Feng Tsai

Deep metric learning has attracted much attention in recent years, due to seamlessly combining the distance metric learning and deep neural network. Many endeavors are devoted to design different pair-based angular loss functions, which…

Computer Vision and Pattern Recognition · Computer Science 2020-11-06 Dingyi Zhang , Yingming Li , Zhongfei Zhang