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Segmentation of cerebral blood vessels from Magnetic Resonance Imaging (MRI) is an open problem that could be solved with deep learning (DL). However, annotated data for training is often scarce. Due to the absence of open-source tools, we…

Image and Video Processing · Electrical Eng. & Systems 2023-03-10 Georgia Kenyon , Stephan Lau , Michael A. Chappell , Mark Jenkinson

The performance of deep neural networks typically increases with the number of training images. However, not all images have the same importance towards improved performance and robustness. In fetal brain MRI, abnormalities exacerbate the…

Segmentation of structural and diffusion MRI (sMRI/dMRI) is usually performed independently in neuroimaging pipelines. However, some brain structures (e.g., globus pallidus, thalamus and its nuclei) can be extracted more accurately by…

Computer Vision and Pattern Recognition · Computer Science 2019-03-12 Juan Eugenio Iglesias , Koen Van Leemput , Polina Golland , Anastasia Yendiki

This paper presents a new regularization method to train a fully convolutional network for semantic tissue segmentation in histopathological images. This method relies on the benefit of unsupervised learning, in the form of image…

Computer Vision and Pattern Recognition · Computer Science 2020-11-26 C. T. Sari , C. Sokmensuer , C. Gunduz-Demir

Child drawing development optimization (CDDO) is a recent example of a metaheuristic algorithm. The motive for inventing this method is children's learning behavior and cognitive development, with the golden ratio employed to optimize their…

Neural and Evolutionary Computing · Computer Science 2023-05-17 Azad A. Ameen , Tarik A. Rashid , Shavan Askar

Non-human primates (NHPs) serve as critical models for understanding human brain function and neurological disorders due to their close evolutionary relationship with humans. Accurate brain tissue segmentation in NHPs is critical for…

Fetal brain tissue segmentation in magnetic resonance imaging (MRI) is a crucial tool that supports understanding of neurodevelopment, yet it faces challenges due to the heterogeneity of data coming from different scanners and settings, as…

Unsupervised Semantic Segmentation (USS) involves segmenting images without relying on predefined labels, aiming to alleviate the burden of extensive human labeling. Existing methods utilize features generated by self-supervised models and…

Computer Vision and Pattern Recognition · Computer Science 2024-04-08 Baran Ozaydin , Tong Zhang , Deblina Bhattacharjee , Sabine Süsstrunk , Mathieu Salzmann

The goal of this paper is to present a new efficient image segmentation method based on evolutionary computation which is a model inspired from human behavior. Based on this model, a four layer process for image segmentation is proposed…

Computer Vision and Pattern Recognition · Computer Science 2017-12-07 Roohollah Aslanzadeh , Kazem Qazanfari , Mohammad Rahmati

MR imaging is a valuable diagnostic tool allowing to non-invasively visualize patient anatomy and pathology with high soft-tissue contrast. However, MRI acquisition is typically time-consuming, leading to patient discomfort and increased…

Image and Video Processing · Electrical Eng. & Systems 2025-12-23 Jan Nikolas Morshuis , Matthias Hein , Christian F. Baumgartner

High-resolution segmentation is critical for precise disease diagnosis by extracting fine-grained morphological details. Existing hierarchical encoder-decoder frameworks have demonstrated remarkable adaptability across diverse medical…

Image and Video Processing · Electrical Eng. & Systems 2025-07-22 Qing Xu , Zhenye Lou , Chenxin Li , Yue Li , Xiangjian He , Tesema Fiseha Berhanu , Rong Qu , Wenting Duan , Zhen Chen

For machine learning-based prognosis and diagnosis of rare diseases, such as pediatric brain tumors, it is necessary to gather medical imaging data from multiple clinical sites that may use different devices and protocols. Deep…

Evolutionary search is well suited for large-scale biophysical brain modeling, where many parameters with nonlinear interactions and no tractable gradients need to be optimized. Standard evolutionary approaches achieve an excellent fit to…

Neural and Evolutionary Computing · Computer Science 2026-04-06 Hormoz Shahrzad , Niharika Gajawelli , Kaitlin Maile , Manish Saggar , Risto Miikkulainen

In image processing, image segmentation is the process of partitioning a digital image into multiple image segment. Among state-of-the-art methods, Markov Random Fields (MRF) can be used to model dependencies between pixels, and achieve a…

Emerging Technologies · Computer Science 2024-01-05 Timothe Presles , Cyrille Enderli , Gilles Burel , El Houssain Baghious

Segmentation has been a major task in neuroimaging. A large number of automated methods have been developed for segmenting healthy and diseased brain tissues. In recent years, deep learning techniques have attracted a lot of attention as a…

Image and Video Processing · Electrical Eng. & Systems 2019-07-05 Jimit Doshi , Guray Erus , Mohamad Habes , Christos Davatzikos

Brain MR image segmentation is a key task in neuroimaging studies. It is commonly conducted using standard computational tools, such as FSL, SPM, multi-atlas segmentation etc, which are often registration-based and suffer from expensive…

Image and Video Processing · Electrical Eng. & Systems 2019-08-29 Chengliang Dai , Yuanhan Mo , Elsa Angelini , Yike Guo , Wenjia Bai

Automation of brain tumor segmentation in 3D magnetic resonance images (MRIs) is key to assess the diagnostic and treatment of the disease. In recent years, convolutional neural networks (CNNs) have shown improved results in the task.…

Image and Video Processing · Electrical Eng. & Systems 2021-01-01 Laura Mora Ballestar , Veronica Vilaplana

This paper introduces a comprehensive approach for segmenting regions of interest (ROI) in diverse medical imaging datasets, encompassing ultrasound, CT scans, and X-ray images. The proposed method harnesses the capabilities of the YOLOv8…

Computer Vision and Pattern Recognition · Computer Science 2023-10-23 Sumit Pandey , Kuan-Fu Chen , Erik B. Dam

Brain extraction from images is a common pre-processing step. Many approaches exist, but they are frequently only designed to perform brain extraction from images without strong pathologies. Extracting the brain from images with strong…

Computer Vision and Pattern Recognition · Computer Science 2018-05-10 Xu Han , Roland Kwitt , Stephen Aylward , Spyridon Bakas , Bjoern Menze , Alexander Asturias , Paul Vespa , John Van Horn , Marc Niethammer

In recent years, "U-shaped" neural networks featuring encoder and decoder structures have gained popularity in the field of medical image segmentation. Various variants of this model have been developed. Nevertheless, the evaluation of…

Image and Video Processing · Electrical Eng. & Systems 2023-06-02 Qi Ye , Lihua Guo