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Related papers: Slot Filling for Biomedical Information Extraction

200 papers

Event extraction (EE) is the task of identifying interested event mentions from text. Conventional efforts mainly focus on the supervised setting. However, these supervised models cannot generalize to event types out of the pre-defined…

Computation and Language · Computer Science 2022-11-15 Hongming Zhang , Wenlin Yao , Dong Yu

Event argument extraction (EAE) aims to extract arguments with given roles from texts, which have been widely studied in natural language processing. Most previous works have achieved good performance in specific EAE datasets with dedicated…

Computation and Language · Computer Science 2022-09-07 Jie Zhou , Qi Zhang , Qin Chen , Liang He , Xuanjing Huang

We consider a joint information extraction (IE) model, solving named entity recognition, coreference resolution and relation extraction jointly over the whole document. In particular, we study how to inject information from a knowledge base…

Computation and Language · Computer Science 2021-07-07 Severine Verlinden , Klim Zaporojets , Johannes Deleu , Thomas Demeester , Chris Develder

As information extraction (IE) systems have grown more adept at processing whole documents, the classic task of template filling has seen renewed interest as benchmark for document-level IE. In this position paper, we call into question the…

Computation and Language · Computer Science 2023-10-24 William Gantt , Reno Kriz , Yunmo Chen , Siddharth Vashishtha , Aaron Steven White

Few-shot learning arises in important practical scenarios, such as when a natural language understanding system needs to learn new semantic labels for an emerging, resource-scarce domain. In this paper, we explore retrieval-based methods…

Computation and Language · Computer Science 2021-04-14 Dian Yu , Luheng He , Yuan Zhang , Xinya Du , Panupong Pasupat , Qi Li

Open Information Extraction (OpenIE) represents a crucial NLP task aimed at deriving structured information from unstructured text, unrestricted by relation type or domain. This survey paper provides an overview of OpenIE technologies…

Computation and Language · Computer Science 2024-10-25 Pai Liu , Wenyang Gao , Wenjie Dong , Lin Ai , Ziwei Gong , Songfang Huang , Zongsheng Li , Ehsan Hoque , Julia Hirschberg , Yue Zhang

Universal Information Extraction~(Universal IE) aims to solve different extraction tasks in a uniform text-to-structure generation manner. Such a generation procedure tends to struggle when there exist complex information structures to be…

Computation and Language · Computer Science 2023-06-21 Xin Cong. Bowen Yu , Mengcheng Fang , Tingwen Liu , Haiyang Yu , Zhongkai Hu , Fei Huang , Yongbin Li , Bin Wang

State-of-the-art slot filling models for goal-oriented human/machine conversational language understanding systems rely on deep learning methods. While multi-task training of such models alleviates the need for large in-domain annotated…

Artificial Intelligence · Computer Science 2017-07-11 Ankur Bapna , Gokhan Tur , Dilek Hakkani-Tur , Larry Heck

With the rapid development of large language models (LLMs), more and more researchers have paid attention to information extraction based on LLMs. However, there are still some spaces to improve in the existing related methods. First,…

Computation and Language · Computer Science 2026-03-24 Jiang Liu , Ge Qiu , Hao Fei , Dongdong Xie , Jinbo Li , Fei Li , Chong Teng , Donghong Ji

Visual Information Extraction (VIE) task aims to extract key information from multifarious document images (e.g., invoices and purchase receipts). Most previous methods treat the VIE task simply as a sequence labeling problem or…

Computer Vision and Pattern Recognition · Computer Science 2021-06-25 Guozhi Tang , Lele Xie , Lianwen Jin , Jiapeng Wang , Jingdong Chen , Zhen Xu , Qianying Wang , Yaqiang Wu , Hui Li

To minimize the accelerating amount of time invested in the biomedical literature search, numerous approaches for automated knowledge extraction have been proposed. Relation extraction is one such task where semantic relations between the…

Computation and Language · Computer Science 2020-09-22 Shweta Yadav , Srivatsa Ramesh , Sriparna Saha , Asif Ekbal

The rapid expansion of medical informatics literature presents significant challenges in synthesizing and analyzing research trends. This study introduces a novel dataset derived from the Medical Informatics Europe (MIE) Conference…

Information Retrieval · Computer Science 2024-10-08 Ehsan Bitaraf , Maryam Jafarpour

Large Language Models (LLMs) demonstrate remarkable potential across various domains; however, they exhibit a significant performance gap in Information Extraction (IE). Note that high-quality instruction data is the vital key for enhancing…

Computation and Language · Computer Science 2024-05-28 Honghao Gui , Lin Yuan , Hongbin Ye , Ningyu Zhang , Mengshu Sun , Lei Liang , Huajun Chen

Medical entity linking is the task of identifying and standardizing medical concepts referred to in an unstructured text. Most of the existing methods adopt a three-step approach of (1) detecting mentions, (2) generating a list of candidate…

Computation and Language · Computer Science 2021-08-24 Shikhar Vashishth , Denis Newman-Griffis , Rishabh Joshi , Ritam Dutt , Carolyn Rose

Due to the exponential growth of biomedical literature, event and relation extraction are important tasks in biomedical text mining. Most work only focus on relation extraction, and detect a single entity pair mention on a short span of…

Computation and Language · Computer Science 2020-05-08 Elaheh ShafieiBavani , Antonio Jimeno Yepes , Xu Zhong , David Martinez Iraola

Multimodal information extraction (MIE) aims to extract structured information from unstructured multimedia content. Due to the diversity of tasks and settings, most current MIE models are task-specific and data-intensive, which limits…

Computation and Language · Computer Science 2023-10-05 Yuxuan Sun , Kai Zhang , Yu Su

Universal Information Extraction (UIE) has garnered significant attention due to its ability to address model explosion problems effectively. Extractive UIE can achieve strong performance using a relatively small model, making it widely…

Computation and Language · Computer Science 2025-02-19 Lu Yang , Jiajia Li , En Ci , Lefei Zhang , Zuchao Li , Ping Wang

Automatic extraction of medical information from clinical documents poses several challenges: high costs of required clinical expertise, limited interpretability of model predictions, restricted computational resources and privacy…

Relation extraction (RE) is a sub-discipline of information extraction (IE) which focuses on the prediction of a relational predicate from a natural-language input unit (such as a sentence, a clause, or even a short paragraph consisting of…

Computation and Language · Computer Science 2022-12-20 Alessandro Temperoni , Maria Biryukov , Martin Theobald

Envision an intelligent agent capable of assisting users in conducting forecasting tasks through intuitive, natural conversations, without requiring in-depth knowledge of the underlying machine learning (ML) processes. A significant…

Computation and Language · Computer Science 2023-09-08 Md Mahadi Hassan , Alex Knipper , Shubhra Kanti Karmaker