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Nonnegative matrix factorization (NMF) has become a very popular technique in machine learning because it automatically extracts meaningful features through a sparse and part-based representation. However, NMF has the drawback of being…

Machine Learning · Statistics 2012-12-07 Nicolas Gillis

The recent work by Rendle et al. (2020), based on empirical observations, argues that matrix-factorization collaborative filtering (MCF) compares favorably to neural collaborative filtering (NCF), and conjectures the dot product's…

Information Retrieval · Computer Science 2021-10-26 Da Xu , Chuanwei Ruan , Evren Korpeoglu , Sushant Kumar , Kannan Achan

Federated recommender systems have distinct advantages in terms of privacy protection over traditional recommender systems that are centralized at a data center. However, previous work on federated recommender systems does not fully…

Information Retrieval · Computer Science 2023-03-07 Yujie Lin , Pengjie Ren , Zhumin Chen , Zhaochun Ren , Dongxiao Yu , Jun Ma , Maarten de Rijke , Xiuzhen Cheng

Understanding the association between dietary patterns and health outcomes, such as the cancer risk, is crucial to inform public health guidelines and shaping future dietary interventions. However, dietary intake data present several…

Methodology · Statistics 2025-10-10 Blake Hansen , Dafne Zorzetto , Valeria Edefonti , Roberta De Vito

Multimorbidity, or the presence of several medical conditions in the same individual, has been increasing in the population, both in absolute and relative terms. However, multimorbidity remains poorly understood, and the evidence from…

Non-negative Matrix Factorization (NMF) asks to decompose a (entry-wise) non-negative matrix into the product of two smaller-sized nonnegative matrices, which has been shown intractable in general. In order to overcome this issue, the…

Data Structures and Algorithms · Computer Science 2019-07-15 Zhihuai Chen , Yinan Li , Xiaoming Sun , Pei Yuan , Jialin Zhang

Non-negative matrix factorization (NMF) is widely used for dimensionality reduction and interpretable analysis, but standard formulations are unsupervised and cannot directly exploit class labels. Existing supervised or semi-supervised…

Machine Learning · Computer Science 2025-10-14 Kenichi Satoh

Symmetric Nonnegative Matrix Factorization (SNMF) models arise naturally as simple reformulations of many standard clustering algorithms including the popular spectral clustering method. Recent work has demonstrated that an elementary…

Computer Vision and Pattern Recognition · Computer Science 2016-09-20 Reza Borhani , Jeremy Watt , Aggelos Katsaggelos

Motivation: Combination therapies have been widely used to treat cancers. However, it is cost- and time-consuming to experimentally screen synergistic drug pairs due to the enormous number of possible drug combinations. Thus, computational…

Quantitative Methods · Quantitative Biology 2020-09-17 Zexuan Sun , Shujun Huang , Peiran Jiang , Pingzhao Hu

Nonnegative Matrix Factorization (NMF) is a versatile and powerful tool for discovering latent structures in data matrices, with many variations proposed in the literature. Recently, Leplat et al.\@ (2019) introduced a minimum-volume NMF…

Machine Learning · Statistics 2023-09-26 Duc Toan Nguyen , Eric C. Chi

Matrix factorization (MF) discovers latent features from observations, which has shown great promises in the fields of collaborative filtering, data compression, feature extraction, word embedding, etc. While many problem-specific…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-08-14 Wei Tan , Shiyu Chang , Liana Fong , Cheng Li , Zijun Wang , Liangliang Cao

Non-negative Matrix Factorization(NMF) algorithm can only be used to find low rank approximation of original non-negative data while Concept Factorization(CF) algorithm extends matrix factorization to single non-linear kernel space,…

Machine Learning · Computer Science 2024-10-29 Fei Li , Liang Du , Chaohong Ren

Non-negative matrix factorization (NMF) is a fundamental non-convex optimization problem with numerous applications in Machine Learning (music analysis, document clustering, speech-source separation etc). Despite having received extensive…

Machine Learning · Computer Science 2020-03-20 Ioannis Panageas , Stratis Skoulakis , Antonios Varvitsiotis , Xiao Wang

Nonnegative matrix factorization (NMF) has been widely used in machine learning and signal processing because of its non-subtractive, part-based property which enhances interpretability. It is often assumed that the latent dimensionality…

Machine Learning · Statistics 2018-10-25 Zhaoqiang Liu

Node embedding learns a low-dimensional representation for each node in the graph. Recent progress on node embedding shows that proximity matrix factorization methods gain superb performance and scale to large graphs with millions of nodes.…

Machine Learning · Computer Science 2021-08-13 Xingyi Zhang , Kun Xie , Sibo Wang , Zengfeng Huang

Low-rank matrix factorizations are a class of linear models widely used in various fields such as machine learning, signal processing, and data analysis. These models approximate a matrix as the product of two smaller matrices, where the…

Machine Learning · Computer Science 2024-12-10 Olivier Vu Thanh

Extracting genetic information from a full range of sequencing data is important for understanding diseases. We propose a novel method to effectively explore the landscape of genetic mutations and aggregate them to predict cancer type. We…

Genomics · Quantitative Biology 2018-10-10 Zexian Zeng , Andy Vo , Chengsheng Mao , Susan E Clare , Seema A Khan , Yuan Luo

Analog computing based on memristor technology is a promising solution to accelerating the inference phase of deep neural networks (DNNs). A fundamental problem is to map an arbitrary matrix to a memristor crossbar array (MCA) while…

Emerging Technologies · Computer Science 2019-11-28 Baogang Zhang , Necati Uysal , Deliang Fan , Rickard Ewetz

Drug promiscuity and polypharmacology are much discussed topics in pharmaceutical research. Drug repositioning applies established drugs to new disease indications with increasing success. As polypharmacology, defined a drug's ability to…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-05-16 Antonios Makris

Nonnegative Matrix Factorization(NMF) is a common used technique in machine learning to extract features out of data such as text documents and images thanks to its natural clustering properties. In particular, it is popular in image…

Computer Vision and Pattern Recognition · Computer Science 2016-08-05 Giovanni Barbarino