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The goal of graph inference is to design algorithms for learning properties of a hidden graph using queries to an oracle that returns information about the graph. Graph reconstruction, verification, and property testing are all types of…

Data Structures and Algorithms · Computer Science 2025-02-26 Huck Bennett , Mitchell Black , Amir Nayyeri , Evelyn Warton

The forest-of-octrees approach to parallel adaptive mesh refinement and coarsening (AMR) has recently been demonstrated in the context of a number of large-scale PDE-based applications. Although linear octrees, which store only leaf…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-11-05 Tobin Isaac , Carsten Burstedde , Lucas C. Wilcox , Omar Ghattas

The distinguishing number (index) $D(G)$ ($D'(G)$) of a graph $G$ is the least integer $d$ such that $G$ has an vertex (edge) labeling with $d$ labels that is preserved only by the trivial automorphism. It is known that for every graph $G$…

Combinatorics · Mathematics 2017-08-11 Saeid Alikhani , Sandi Klavžar , Florian Lehner , Samaneh Soltani

By a map we mean a $2$-cell decomposition of a closed compact surface, i.e., an embedding of a graph such that every face is homeomorphic to an open disc. Automorphism of a map can be thought of as a permutation of the vertices which…

Combinatorics · Mathematics 2021-01-08 Ken-ichi Kawarabayashi , Bojan Mohar , Roman Nedela , Peter Zeman

We propose a novel tree-like curvilinear structure reconstruction algorithm based on supervised learning and graph theory. In this work we analyze image patches to obtain the local major orientations and the rankings that correspond to the…

Computer Vision and Pattern Recognition · Computer Science 2016-12-09 Seong-Gyun Jeong , Yuliya Tarabalka , Nicolas Nisse , Josiane Zerubia

The recently introduced graph parameter tree-cut width plays a similar role with respect to immersions as the graph parameter treewidth plays with respect to minors. In this paper, we provide the first algorithmic applications of tree-cut…

Data Structures and Algorithms · Computer Science 2022-06-03 Robert Ganian , Eun Jung Kim , Stefan Szeider

A red-white coloring of a nontrivial connected graph $G$ is an assignment of red and white colors to the vertices of~$G$. Associated with each vertex $v$ of $G$ of diameter $d$ is a $d$-vector, called the code of $v$, whose $i$th coordinate…

Combinatorics · Mathematics 2025-04-09 Yuya Kono

The isolation forest algorithm for outlier detection exploits a simple yet effective observation: if taking some multivariate data and making uniformly random cuts across the feature space recursively, it will take fewer such random cuts…

Machine Learning · Statistics 2021-11-24 David Cortes

In this paper, we prove that the self-dual morphological hierarchical structure computed on a n-D gray-level wellcomposed image u by the algorithm of G{\'e}raud et al. [1] is exactly the mathematical structure defined to be the tree of…

Discrete Mathematics · Computer Science 2022-06-13 Thierry GÉraud , Nicolas Boutry , Sébastien Crozet , Edwin Carlinet , Laurent Najman

Stanley introduced the concept of chromatic symmetric functions of graphs which extends and refines the notion of chromatic polynomials of graphs, and asked whether trees are determined up to isomorphism by their chromatic symmetric…

Combinatorics · Mathematics 2024-02-21 Yuzhenni Wang , Xingxing Yu , Xiao-Dong Zhang

A simple and computationally efficient scheme for tree-structured vector quantization is presented. Unlike previous methods, its quantization error depends only on the intrinsic dimension of the data distribution, rather than the apparent…

Machine Learning · Statistics 2008-05-12 Sanjoy Dasgupta , Yoav Freund

Decision trees are an extremely popular machine learning technique. Unfortunately, overfitting in decision trees still remains an open issue that sometimes prevents achieving good performance. In this work, we present a novel approach for…

Machine Learning · Computer Science 2019-06-05 Rafael Garcia Leiva , Antonio Fernandez Anta , Vincenzo Mancuso , Paolo Casari

Topological phylogenetic trees can be assigned edge weights in several natural ways, highlighting different aspects of the tree. Here the rooted triple and quartet metrizations are introduced, and applied to formulate novel fast methods of…

Populations and Evolution · Quantitative Biology 2019-05-15 John A. Rhodes

The alignment of two similar graphs from different domains is a well-studied problem. In many practical usages, there is no reliable information or labels over the vertices or edges, leaving structural similarity as the only information…

Social and Information Networks · Computer Science 2022-08-22 Barak Babayov , Yoram Louzoun

The LR-drawing-method is a method of drawing an ordered rooted binary tree based on drawing one root-to-leaf path on a vertical line and attaching recursively obtained drawings of the subtrees on the left and right. In this paper, we study…

Computational Geometry · Computer Science 2021-05-17 Therese Biedl , Giuseppe Liotta , Jayson Lynch , Fabrizio Montecchiani

The kernel method is a potential approach to analyzing structured data such as sequences, trees, and graphs; however, unordered trees have not been investigated extensively. Kimura et al. (2011) proposed a kernel function for unordered…

Data Structures and Algorithms · Computer Science 2012-06-22 Daisuke Kimura , Hisashi Kashima

Working with generating functions, the combinatorics of a recurrence relation can be expressed in a way that allows for more efficient calculation of the quantity. This is true of the Catalan numbers for an ordered binary tree…

Combinatorics · Mathematics 2025-03-05 David Serena , William J Buchanan

We study the parameterized complexity of the graph isomorphism problem when parameterized by width parameters related to tree decompositions. We apply the following technique to obtain fixed-parameter tractability for such parameters. We…

Discrete Mathematics · Computer Science 2014-03-31 Yota Otachi , Pascal Schweitzer

Phylogenetic networks are a type of directed acyclic graph that represent how a set $X$ of present-day species are descended from a common ancestor by processes of speciation and reticulate evolution. In the absence of reticulate evolution,…

Combinatorics · Mathematics 2017-08-11 Andrew Francis , Charles Semple , Mike Steel

Stanley asked whether a tree is determined up to isomorphism by its chromatic symmetric function. We approach Stanley's problem by studying the relationship between the chromatic symmetric function and other invariants. First, we prove…

Combinatorics · Mathematics 2024-07-24 José Aliste-Prieto , Jeremy L. Martin , Jennifer D. Wagner , José Zamora
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