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Metagenomic binning aims to cluster DNA fragments from mixed microbial samples into their respective genomes, a critical step for downstream analyses of microbial communities. Existing methods rely on deterministic representations, such as…

Machine Learning · Computer Science 2025-10-01 Abdulkadir Celikkanat , Andres R. Masegosa , Mads Albertsen , Thomas D. Nielsen

In this study, we present a novel clinical decision support system and discuss its interpretability-related properties. It combines a decision set of rules with a machine learning scheme to offer global and local interpretability. More…

Methodology · Statistics 2021-07-16 Francisco Valente , Simão Paredes , Jorge Henriques

In machine learning, classification tasks serve as the cornerstone of a wide range of real-world applications. Reliable, trustworthy classification is particularly intricate in biomedical settings, where the ground truth is often inherently…

Machine Learning · Computer Science 2023-11-14 Aina Tersol Montserrat , Alexander R. Loftus , Yael Daihes

We propose principled prediction intervals to quantify the uncertainty of a large class of synthetic control predictions (or estimators) in settings with staggered treatment adoption, offering precise non-asymptotic coverage probability…

Econometrics · Economics 2025-02-04 Matias D. Cattaneo , Yingjie Feng , Filippo Palomba , Rocio Titiunik

Standard Occupational Classifiers (SOC) are systems used to categorize and classify different types of jobs and occupations based on their similarities in terms of job duties, skills, and qualifications. Integrating these facets with Big…

Computation and Language · Computer Science 2025-12-01 Sidharth Rony , Jack Patman

Black-box machine learning models are now routinely used in high-risk settings, like medical diagnostics, which demand uncertainty quantification to avoid consequential model failures. Conformal prediction is a user-friendly paradigm for…

Machine Learning · Computer Science 2022-12-08 Anastasios N. Angelopoulos , Stephen Bates

In recent years, neural architecture-based recommender systems have achieved tremendous success, but they still fall short of expectation when dealing with highly sparse data. Self-supervised learning (SSL), as an emerging technique for…

Information Retrieval · Computer Science 2023-06-05 Junliang Yu , Hongzhi Yin , Xin Xia , Tong Chen , Jundong Li , Zi Huang

Class distribution skews in imbalanced datasets may lead to models with prediction bias towards majority classes, making fair assessment of classifiers a challenging task. Metrics such as Balanced Accuracy are commonly used to evaluate a…

Regression tasks, notably in safety-critical domains, require proper uncertainty quantification, yet the literature remains largely classification-focused. In this light, we introduce a family of measures for total, aleatoric, and epistemic…

Machine Learning · Computer Science 2025-10-30 Christopher Bülte , Yusuf Sale , Gitta Kutyniok , Eyke Hüllermeier

Class-wise characteristics of training examples affect the performance of deep classifiers. A well-studied example is when the number of training examples of classes follows a long-tailed distribution, a situation that is likely to yield…

Machine Learning · Computer Science 2025-05-02 Z. S. Baltaci , K. Oksuz , S. Kuzucu , K. Tezoren , B. K. Konar , A. Ozkan , E. Akbas , S. Kalkan

Process capability indices such as $C_{pk}$ are widely used for manufacturing decisions, yet are typically applied via deterministic thresholding of finite-sample estimates, ignoring uncertainty and leading to unstable outcomes near the…

Applications · Statistics 2026-04-16 Fei Jiang , Lei Yang

Conformal inference is a method that provides prediction sets for machine learning models, operating independently of the underlying distributional assumptions and relying solely on the exchangeability of training and test data. Despite its…

Methodology · Statistics 2025-10-01 Daniela Corbetta , Livio Finos , Ludwig Geistlinger , Davide Risso

Most Neural Networks (NNs) for classification are trained using Cross-Entropy as a loss function. This approach requires the model to have an explicit classification layer. However, there exist alternative approaches, such as Contrastive…

Machine Learning · Computer Science 2026-04-27 Leonardo Arrighi , Julia Eva Belloni , Aurélie Gallet , Ivan Gentile , Matteo Lippi , Marco Zullich

We study the problem of classification with selectively labeled data, whose distribution may differ from the full population due to historical decision-making. We exploit the fact that in many applications historical decisions were made by…

Machine Learning · Statistics 2025-05-28 Jian Chen , Zhehao Li , Xiaojie Mao

Standard conformal prediction offers a marginal guarantee on coverage, but for prediction sets to be truly useful, they should ideally ensure coverage conditional on each test point. Unfortunately, it is impossible to achieve exact,…

Machine Learning · Computer Science 2025-02-11 Jivat Neet Kaur , Michael I. Jordan , Ahmed Alaa

Deep clustering as an important branch of unsupervised representation learning focuses on embedding semantically similar samples into the identical feature space. This core demand inspires the exploration of contrastive learning and…

Computer Vision and Pattern Recognition · Computer Science 2024-04-16 Haifeng Xia , Hai Huang , Zhengming Ding

Standard conformal prediction methods provide a marginal coverage guarantee, which means that for a random test point, the conformal prediction set contains the true label with a user-specified probability. In many classification problems,…

Decision Focused Learning has emerged as a critical paradigm for integrating machine learning with downstream optimisation. Despite its promise, existing methodologies predominantly rely on probabilistic models and focus narrowly on task…

Machine Learning · Computer Science 2025-03-21 Keivan Shariatmadar , Neil Yorke-Smith , Ahmad Osman , Fabio Cuzzolin , Hans Hallez , David Moens

Generative models lack rigorous statistical guarantees for their outputs and are therefore unreliable in safety-critical applications. In this work, we propose Sequential Conformal Prediction for Generative Models (SCOPE-Gen), a sequential…

Machine Learning · Computer Science 2025-02-18 Klaus-Rudolf Kladny , Bernhard Schölkopf , Michael Muehlebach

Automated classifiers (ACs), often built via supervised machine learning (SML), can categorize large, statistically powerful samples of data ranging from text to images and video, and have become widely popular measurement devices in…

Machine Learning · Computer Science 2024-12-10 Nathan TeBlunthuis , Valerie Hase , Chung-Hong Chan
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