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Statistical shape modeling is the computational process of discovering significant shape parameters from segmented anatomies captured by medical images (such as MRI and CT scans), which can fully describe subject-specific anatomy in the…

Computer Vision and Pattern Recognition · Computer Science 2023-08-01 Krithika Iyer , Shireen Elhabian

Representing 3D shape deformations by linear models in high-dimensional space has many applications in computer vision and medical imaging, such as shape-based interpolation or segmentation. Commonly, using Principal Components Analysis a…

Computer Vision and Pattern Recognition · Computer Science 2016-05-12 Florian Bernard , Peter Gemmar , Frank Hertel , Jorge Goncalves , Johan Thunberg

This paper presents a new axis-based shape representation scheme along with a matching framework to address the problem of generic shape recognition. The main idea is to define the relative spatial arrangement of local symmetry axes and…

Computer Vision and Pattern Recognition · Computer Science 2011-04-15 Cagri Aslan , Sibel Tari

The subject of features normalization plays an important central role in data representation, characterization, visualization, analysis, comparison, classification, and modeling, as it can substantially influence and be influenced by all of…

Machine Learning · Computer Science 2024-09-18 Alexandre Benatti , Luciano da F. Costa

Geometric morphometrics (GMM) is widely used to quantify shape variation, more recently serving as input for machine learning (ML) analyses. Standard practice aligns all specimens via Generalized Procrustes Analysis (GPA) prior to splitting…

Computer Vision and Pattern Recognition · Computer Science 2026-01-27 Lloyd Austin Courtenay

We introduce a statistical physics inspired supervised machine learning algorithm for classification and regression problems. The method is based on the invariances or stability of predicted results when known data is represented as…

Machine Learning · Statistics 2018-11-19 Patrick Chao , Tahereh Mazaheri , Bo Sun , Nicholas B. Weingartner , Zohar Nussinov

We present a framework for shape matching in computational anatomy allowing users control of the degree to which the matching is diffeomorphic. This control is given as a function defined over the image and parameterises the template…

Image and Video Processing · Electrical Eng. & Systems 2019-05-23 Andreas Bock , Alexis Arnaudon , Colin Cotter

We present a new method for stochastic shape optimisation of engineering structures. The method generalises an existing deterministic scheme, in which the structure is represented and evolved by a level-set method coupled with mathematical…

Statistical Mechanics · Physics 2017-09-13 Lester O. Hedges , H. Alicia Kim , Robert L. Jack

We address the problem of estimating the alignment pose between two models using structure-specific local descriptors. Our descriptors are generated using a combination of 2D image data and 3D contextual shape data, resulting in a set of…

Computer Vision and Pattern Recognition · Computer Science 2017-08-24 Anders Glent Buch , Dirk Kraft , Joni-Kristian Kamarainen , Henrik Gordon Petersen , Norbert Krüger

Statistical shape models (SSMs) are an established way to represent the anatomy of a population with various clinically relevant applications. However, they typically require domain expertise, and labor-intensive landmark annotations to…

Computer Vision and Pattern Recognition · Computer Science 2023-07-25 Lennart Bastian , Alexander Baumann , Emily Hoppe , Vincent Bürgin , Ha Young Kim , Mahdi Saleh , Benjamin Busam , Nassir Navab

In this work, we develop a framework for shape analysis using inconsistent surface mapping. Traditional landmark-based geometric morphometrics methods suffer from the limited degrees of freedom, while most of the more advanced non-rigid…

Computational Geometry · Computer Science 2020-10-30 Gary P. T. Choi , Di Qiu , Lok Ming Lui

We use tools from geometric statistics to analyze the usual estimation procedure of a template shape. This applies to shapes from landmarks, curves, surfaces, images etc. We demonstrate the asymptotic bias of the template shape estimation…

Computer Vision and Pattern Recognition · Computer Science 2017-02-03 Nina Miolane , Susan Holmes , Xavier Pennec

Stochastic parameterisations deployed in models of the Earth system frequently invoke locality assumptions such as Markovianity or spatial locality. This work highlights the impact of such assumptions on predictive performance. Both in…

Dynamical Systems · Mathematics 2025-08-12 Martin T. Brolly

Time series classification is an important task in its own right, and it is often a precursor to further downstream analytics. To date, virtually all works in the literature have used either shape-based classification using a distance…

Machine Learning · Computer Science 2019-12-23 Sara Alaee , Alireza Abdoli , Christian Shelton , Amy C. Murillo , Alec C. Gerry , Eamonn Keogh

A novel approach for structure alignment is presented, where the key ingredients are: (1) An error function formulation of the problem simultaneously in terms of binary (Potts) assignment variables and real-valued atomic coordinates. (2)…

Biological Physics · Physics 2007-05-23 M. Ohlsson , C. Peterson , M. Ringner , R. Blankenbecler

Key to structured prediction is exploiting the problem structure to simplify the learning process. A major challenge arises when data exhibit a local structure (e.g., are made by "parts") that can be leveraged to better approximate the…

Machine Learning · Statistics 2019-06-03 Carlo Ciliberto , Francis Bach , Alessandro Rudi

Building on recent developments in models focused on the shape properties of odds ratios, this paper introduces two new models that expand the class of available distributions while preserving specific shape characteristics of an underlying…

Statistics Theory · Mathematics 2025-03-11 Idir Arab , Milto Hadjikyriakou , Paulo Eduardo Oliveira

Structural quantities such as order parameters and correlation functions are often employed to gain insight into the physical behavior and properties of condensed matter systems. While standard quantities for characterizing structure exist,…

Soft Condensed Matter · Physics 2017-08-23 Aaron S. Keys , Christopher R. Iacovella , Sharon C. Glotzer

This paper introduces and demonstrates a computational pipeline for the statistical analysis of shape graph datasets, namely geometric networks embedded in 2D or 3D spaces. Unlike traditional abstract graphs, our purpose is not only to…

Machine Learning · Computer Science 2026-02-19 Murad Hossen , Demetrio Labate , Nicolas Charon

Quantification of anatomical shape changes currently relies on scalar global indexes which are largely insensitive to regional or asymmetric modifications. Accurate assessment of pathology-driven anatomical remodeling is a crucial step for…