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The $k$-mappability problem has two integers parameters $m$ and $k$. For every subword of size $m$ in a text $S$, we wish to report the number of indices in $S$ in which the word occurs with at most $k$ mismatches. The problem was lately…

Data Structures and Algorithms · Computer Science 2021-06-15 Amihood Amir , Itai Boneh , Eitan Kondratovsky

In order to build a large scale quantum computer, one must be able to correct errors extremely fast. We design a fast decoding algorithm for topological codes to correct for Pauli errors and erasure and combination of both errors and…

Quantum Physics · Physics 2021-12-08 Nicolas Delfosse , Naomi H. Nickerson

Optimal prefix codes are studied for pairs of independent, integer-valued symbols emitted by a source with a geometric probability distribution of parameter $q$, $0{<}q{<}1$. By encoding pairs of symbols, it is possible to reduce the…

Information Theory · Computer Science 2013-01-08 Frédérique Bassino , Julien Clément , Gadiel Seroussi , Alfredo Viola

We give an algorithm that finds a zero forcing set which approximates the optimal size by a factor of $\text{pw}(G)+1$, where $\text{pw}(G)$ is the pathwidth of $G$. Starting from a path decomposition, the algorithm runs in $O(nm)$ time,…

Combinatorics · Mathematics 2024-02-15 Ben Cameron , Jeannette Janssen , Rogers Matthew , Zhiyuan Zhang

Let G be an edge-weighted hypergraph on n vertices, m edges of size \le s, where the edges have real weights in an interval [1,W]. We show that if we can approximate a maximum weight matching in G within factor alpha in time T(n,m,W) then…

Data Structures and Algorithms · Computer Science 2011-01-12 Andrzej Lingas , Cui Di

We give a polynomial-time constant-factor approximation algorithm for maximum independent set for (axis-aligned) rectangles in the plane. Using a polynomial-time algorithm, the best approximation factor previously known is $O(\log\log n)$.…

Computational Geometry · Computer Science 2021-07-07 Joseph S. B. Mitchell

The most fundamental problem considered in algorithms for text processing is pattern matching: given a pattern $p$ of length $m$ and a text $t$ of length $n$, does $p$ occur in $t$? Multiple versions of this basic question have been…

Data Structures and Algorithms · Computer Science 2021-11-10 Moses Ganardi , Paweł Gawrychowski

Let a text $T[1..n]$ be the only string generated by a context-free grammar with $g$ (terminal and nonterminal) symbols, and of size $G$ (measured as the sum of the lengths of the right-hand sides of the rules). Such a grammar, called a…

Data Structures and Algorithms · Computer Science 2020-04-03 Francisco Claude , Gonzalo Navarro , Alejandro Pacheco

We present a new algorithm for computing the Lempel-Ziv Factorization (LZ77) of a given string of length $N$ in linear time, that utilizes only $N\log N + O(1)$ bits of working space, i.e., a single integer array, for constant size integer…

Data Structures and Algorithms · Computer Science 2013-10-08 Keisuke Goto , Hideo Bannai

Given a graph of which the n vertices form a regular two-dimensional grid, and in which each (possibly weighted and/or directed) edge connects a vertex to one of its eight neighbours, the following can be done in O(scan(n)) I/Os, provided M…

Data Structures and Algorithms · Computer Science 2012-11-12 Herman Haverkort

We give a deterministic $O(m\log^{2/3}n)$-time algorithm for single-source shortest paths (SSSP) on directed graphs with real non-negative edge weights in the comparison-addition model. This is the first result to break the $O(m+n\log n)$…

Data Structures and Algorithms · Computer Science 2025-07-31 Ran Duan , Jiayi Mao , Xiao Mao , Xinkai Shu , Longhui Yin

We show how to build an alphabetic minimax tree for a sequence (W = w_1, >..., w_n) of real weights in (O (n d \log \log n)) time, where $d$ is the number of distinct integers (\lceil w_i \rceil). We apply this algorithm to building an…

Information Theory · Computer Science 2008-10-29 Travis Gagie

Given strings $P$ and $Q$ the (exact) string matching problem is to find all positions of substrings in $Q$ matching $P$. The classical Knuth-Morris-Pratt algorithm [SIAM J. Comput., 1977] solves the string matching problem in linear time…

Data Structures and Algorithms · Computer Science 2010-09-08 Philip Bille

We give an $\mathcal{O}(n \log n)$-time, $\mathcal{O}(n)$-space algorithm for factoring a string into the minimum number of palindromic substrings. That is, given a string $S [1..n]$, in $\mathcal{O}(n \log n)$ time our algorithm returns…

Data Structures and Algorithms · Computer Science 2020-12-15 Gabriele Fici , Travis Gagie , Juha Kärkkäinen , Dominik Kempa

Let $A$ be a static array storing $n$ elements from a totally ordered set. We present a data structure of optimal size at most $n\log_2(3+2\sqrt{2})+o(n)$ bits that allows us to answer the following queries on $A$ in constant time, without…

Data Structures and Algorithms · Computer Science 2011-02-03 Johannes Fischer

This paper considers fully dynamic graph algorithms with both faster worst case update time and sublinear space. The fully dynamic graph connectivity problem is the following: given a graph on a fixed set of n nodes, process an online…

Data Structures and Algorithms · Computer Science 2015-09-23 David Gibb , Bruce Kapron , Valerie King , Nolan Thorn

We present the first polynomial-time algorithm for computing a near-optimal \emph{flow}-expander decomposition. Given a graph $G$ and a parameter $\phi$, our algorithm removes at most a $\phi\log^{1+o(1)}n$ fraction of edges so that every…

Data Structures and Algorithms · Computer Science 2026-04-29 Nikhil Bansal , Arun Jambulapati , Thatchaphol Saranurak

In this paper, we study the problem of designing prefix-free encoding schemes having minimum average code length that can be decoded efficiently under a decode cost model that captures memory hierarchy induced cost functions. We also study…

Data Structures and Algorithms · Computer Science 2021-10-22 Shashwat Banchhor , Rishikesh Gajjala , Yogish Sabharwal , Sandeep Sen

In this paper, we introduce maximum composition ordering problems. The input is $n$ real functions $f_1,\dots,f_n:\mathbb{R}\to\mathbb{R}$ and a constant $c\in\mathbb{R}$. We consider two settings: total and partial compositions. The…

Data Structures and Algorithms · Computer Science 2016-01-22 Yasushi Kawase , Kazuhisa Makino , Kento Seimi

For $0<\delta <1$ a $\delta$-subrepetition in a word is a factor which exponent is less than~2 but is not less than $1+\delta$ (the exponent of the factor is the ratio of the factor length to its minimal period). The $\delta$-subrepetition…

Data Structures and Algorithms · Computer Science 2022-08-10 Roman Kolpakov