Related papers: Worst-case optimal adaptive alphabetic prefix-free…
Two strings are considered to have parameterized matching when there exists a bijection of the parameterized alphabet onto itself such that it transforms one string to another. Parameterized matching has application in software duplication…
We investigate adaptive sublinear algorithms for detecting monotone patterns in an array. Given fixed $2 \leq k \in \mathbb{N}$ and $\varepsilon > 0$, consider the problem of finding a length-$k$ increasing subsequence in an array $f \colon…
Let $P = \{p(i)\}$ be a measure of strictly positive probabilities on the set of nonnegative integers. Although the countable number of inputs prevents usage of the Huffman algorithm, there are nontrivial $P$ for which known methods find a…
Huffman coding is known to be optimal, yet its dynamic version may be even more efficient in practice. A new variant of Huffman encoding has been proposed recently, that provably always performs better than static Huffman coding by at least…
We present the first worst-case linear time algorithm that directly computes the parameterized suffix and LCP arrays for constant sized alphabets. Previous algorithms either required quadratic time or the parameterized suffix tree to be…
Universal fixed-to-variable lossless source coding for memoryless sources is studied in the finite blocklength and higher-order asymptotics regimes. Optimal third-order coding rates are derived for general fixed-to-variable codes and for…
Let $s$ be a string of length $n$ over an alphabet of constant size $\sigma$ and let $c$ and $\epsilon$ be constants with (1 \geq c \geq 0) and (\epsilon > 0). Using (O (n)) time, (O (n^c)) bits of memory and one pass we can always encode…
We revisit the classic border tree data structure [Gu, Farach, Beigel, SODA 1994] that answers the following prefix-suffix queries on a string $T$ of length $n$ over an integer alphabet $\Sigma=[0,\sigma)$: for any $i,j \in [0,n)$ return…
In this paper we describe compressed indexes that support pattern matching queries for strings with wildcards. For a constant size alphabet our data structure uses $O(n\log^{\varepsilon}n)$ bits for any $\varepsilon>0$ and reports all…
We propose algorithms that, given the input string of length $n$ over integer alphabet of size $\sigma$, construct the Burrows-Wheeler transform (BWT), the permuted longest-common-prefix (PLCP) array, and the LZ77 parsing in…
A border of a string is a non-empty proper prefix of the string that is also a suffix. A string is unbordered if it has no border. The longest unbordered factor is a fundamental notion in stringology, closely related to string periodicity.…
Let $T$ be a string of length $n$ over an integer alphabet of size $\sigma$. In the word RAM model, $T$ can be represented in $O(n /\log_\sigma n)$ space. We show that a representation of all covers of $T$ can be computed in the optimal…
We present a simple and provably optimal non-adaptive cell probe data structure for the static dictionary problem. Our data structure supports storing a set of n key-value pairs from [u]x[u] using s words of space and answering key lookup…
Mauer et al. [A Lempel-Ziv-style Compression Method for Repetitive Texts, PSC 2017] proposed a hybrid text compression method called LZ-LFS which has both features of Lempel-Ziv 77 factorization and longest first substitution. They showed…
Pliable index coding considers a server with m messages, and n clients where each has as side information a subset of the messages. We seek to minimize the number of transmissions the server should make, so that each client receives (any)…
We study sublinear time algorithms for estimating the size of maximum matching in graphs. Our main result is a $(\frac{1}{2}+\Omega(1))$-approximation algorithm which can be implemented in $O(n^{1+\epsilon})$ time, where $n$ is the number…
The observed frequency of the longest proper prefix, the longest proper suffix, and the longest infix of a word $w$ in a given sequence $x$ can be used for classifying $w$ as avoided or overabundant. The definitions used for the expectation…
In this paper we are interested in indexing texts for substring matching queries with one edit error. That is, given a text $T$ of $n$ characters over an alphabet of size $\sigma$, we are asked to build a data structure that answers the…
Abelian string matching problems are becoming an object of considerable interest in last years. Very recently, Alatabbi et al. \cite{AILR2015} presented the first solution for the longest common Abelian factor problem for a pair of strings,…
We present a new algorithm for dynamic prefix-free coding, based on Shannon coding. We give a simple analysis and prove a better upper bound on the length of the encoding produced than the corresponding bound for dynamic Huffman coding. We…