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Related papers: spatialSim: multi-species spatiotemporal size-stru…

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Failing to account for ecological processes such as dispersal and connectivity when modeling distributions can lead to biased inference about environmental drivers and reduced predictive performance. Spatial dynamic occupancy models are…

Populations and Evolution · Quantitative Biology 2026-05-07 Simon Lacombe , Sébastien Devillard , Cécile Kauffmann , Olivier Gimenez

We explore how strategic leaps alter the classic rock-paper-scissors dynamics in spatially structured populations. In our model, individuals can expend energy reserves to jump toward regions with a high density of individuals of the species…

Populations and Evolution · Quantitative Biology 2025-06-23 J. Menezes , R. Barbalho , Y. Sun

Effective management of recreational fisheries requires accurate forecasting of future harvests and real-time monitoring of ongoing harvests. Traditional methods that rely on historical catch data to predict short-term harvests can be…

Quantitative Methods · Quantitative Biology 2025-04-03 A. Challen Hyman , Chloe Ramsay , Tiffanie A. Cross , Beverly Sauls , Thomas K. Frazer

This article deals with the spatio-temporal sensors deployment in order to maximize detection probability of an intelligent and randomly moving target in an area under surveillance. Our work is based on the rare events simulation framework.…

Neural and Evolutionary Computing · Computer Science 2017-02-24 Chouchane Mathieu , Paris Sébastien , Le Gland François , Ouladsine Mustapha

Realistic crowd simulations are essential for immersive virtual environments, relying on both individual behaviors (microscopic dynamics) and overall crowd patterns (macroscopic characteristics). While recent data-driven methods like deep…

Machine Learning · Computer Science 2025-06-18 Thomas Kreutz , Max Mühlhäuser , Alejandro Sanchez Guinea

Experiments in predator-prey systems show the emergence of long-term cycles. Deterministic model typically fails in capturing these behaviors, which emerge from the microscopic interplay of individual based dynamics and stochastic effects.…

Numerical Analysis · Mathematics 2022-03-03 Giacomo Albi , Roberto Chignola , Federica Ferrarese

In this work, we consider the spatial-temporal multi-species competition model. A mathematical model is described by a coupled system of nonlinear diffusion-reaction equations. We use a finite volume approximation with semi-implicit time…

Numerical Analysis · Mathematics 2022-09-08 Maria Vasilyeva , Youwen Wang , Sergei Stepanov , Alexey Sadovski

Spatiotemporal dynamics models are fundamental for various domains, from heat propagation in materials to oceanic and atmospheric flows. However, currently available neural network-based spatiotemporal modeling approaches fall short when…

Machine Learning · Computer Science 2025-02-11 Valerii Iakovlev , Harri Lähdesmäki

This paper presents a novel spatio-temporal LSTM (SPATIAL) architecture for time series forecasting applied to environmental datasets. The framework was evaluated across multiple sensors and for three different oceanic variables: current…

Machine Learning · Statistics 2021-08-27 Yihao Hu , Fearghal O'Donncha , Paulito Palmes , Meredith Burke , Ramon Filgueira , Jon Grant

Quantifying spatial and/or temporal associations in multivariate geolocated data of different types is achievable via spatial random effects in a Bayesian hierarchical model, but severe computational bottlenecks arise when spatial…

Methodology · Statistics 2024-04-02 Michele Peruzzi , David B. Dunson

In this paper we present GeoThinneR, an R package for efficient and flexible spatial thinning of species occurrence data. Spatial thinning is a widely used preprocessing step in species distribution modeling (SDM) that can help reduce…

Populations and Evolution · Quantitative Biology 2025-05-14 J. Mestre-Tomás

Sustainable management of marine ecosystems is vital for maintaining healthy fishery resources, and benefits from advanced scientific tools to accurately assess species distribution patterns. In fisheries science, two primary data sources…

A spatial curve dynamical model framework is adopted for functional prediction of counts in a spatiotemporal log-Gaussian Cox process model. Our spatial functional estimation approach handles both wavelet-based heterogeneity analysis in…

Methodology · Statistics 2020-10-09 Torres-Signes , M. P. Frías , J. Mateu , M. D. Ruiz-Medina

Spatio-temporal systems exhibiting multi-scale behaviour are common in applications ranging from cyber-physical systems to systems biology, yet they present formidable challenges for computational modelling and analysis. Here we consider a…

Quantitative Methods · Quantitative Biology 2019-02-01 Michalis Michaelides , Jane Hillston , Guido Sanguinetti

In this paper, we analyze the dynamics of a multi-species fisheries system in the presence of harvesting. We solve the problem of finding the optimal harvesting strategy for a mid-term horizon with a fixed final stock of each species, while…

Optimization and Control · Mathematics 2025-01-17 L. Bayon , P. Fortuny Ayuso , P. J. Garcia-Nieto , J. A. Otero , P. M. Suarez , C. Tasis

We present a spatial, individual-based predator-prey model in which dispersal is dependent on the local community. We determine species suitability to the biotic conditions of their local environment through a time and space varying fitness…

Populations and Evolution · Quantitative Biology 2008-07-21 Elise Filotas , Martin Grant , Lael Parrott , Per Arne Rikvold

Spatial organization is a core challenge for all large agent-based models with local interactions. In biological tissue models, spatial search and reinsertion are frequently reported as the most expensive steps of the simulation. One of the…

Computational Geometry · Computer Science 2016-11-11 Ilya Dmitrenok , Viktor Drobnyy , Leonard Johard , Manuel Mazzara

In this paper, we propose a Bayesian matrix-variate spatiotemporal modeling framework for jointly analyzing multiple response variables observed at spatial locations over time. The approach relaxes the standard assumption of spatial…

Methodology · Statistics 2026-04-23 Rodrigo de Souza Bulhões , Marina Silva Paez , Dani Gamerman

Spatiotemporal data is increasingly available due to emerging sensor and data acquisition technologies that track moving objects. Spatiotemporal clustering addresses the need to efficiently discover patterns and trends in moving object…

Machine Learning · Computer Science 2024-04-16 Olga Dorabiala , Devavrat Vivek Dabke , Jennifer Webster , Nathan Kutz , Aleksandr Aravkin

Generative modeling of spatio-temporal fields is crucial for a variety of applications, including stochastic weather generators and climate-model surrogates. However, many such fields exhibit complex dependence structures that vary across…

Methodology · Statistics 2026-05-06 Carrie J. Lei-Cramer , Jian Cao , Matthias Katzfuss