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Clonal interference, competition between multiple co-occurring beneficial mutations, has a major role in adaptation of asexual populations. We provide a simple individual based stochastic model of clonal interference taking into account a…

Probability · Mathematics 2015-05-19 Sylvain Billiard , Charline Smadi

Fluctuation and dissipation dynamics is examined at all temperature ranges for the general case of a background time evolving scalar field coupled to heavy intermediate quantum fields which in turn are coupled to light quantum fields. The…

High Energy Physics - Phenomenology · Physics 2008-11-26 Arjun Berera , Ian G. Moss , Rudnei O. Ramos

For some spatially nonlocal diffusion models with a finite range of nonlocal interactions measured by a positive parameter $\delta$, we review their formulation defined on a bounded domain subject to various conditions that correspond to…

Analysis of PDEs · Mathematics 2022-12-27 Qiang Du , Xiaochuan Tian , Zhi Zhou

Predicting competitive outcomes typically requires fitting dynamical models to data, from which interaction strengths and coexistence indicators such as invasion criteria can be produced. Methods that allow to propagate parameter…

Populations and Evolution · Quantitative Biology 2025-04-10 Matthieu Paquet , Frédéric Barraquand

Plankton is the productive base of aquatic ecosystems and plays a major role in the global control of atmospheric carbon dioxide. Nevertheless, after intensive study, the factors that drive its spatial distribution are still far from being…

Biological Physics · Physics 2009-11-07 J. M. G. Vilar , R. V. Sole , J. M. Rubi

In many environmental applications involving spatially-referenced data, limitations on the number and locations of observations motivate the need for practical and efficient models for spatial interpolation, or kriging. A key component of…

Methodology · Statistics 2016-10-11 Mark D. Risser

Operator spreading provides a new characterization of quantum chaos beyond the semi-classical limit. There are two complementary views of how the characteristic size of an operator, also known as the butterfly light cone, grows under…

Statistical Mechanics · Physics 2025-05-13 Tianci Zhou , Éric Brunet , Xiaolin Qi

A tumor can be thought of as an ecosystem, which critically means that we cannot just consider it as a collection of mutated cells but more as a complex system of many interacting cellular and microenvironmental elements. At its simplest, a…

Populations and Evolution · Quantitative Biology 2013-05-03 Jill Gallaher , Alexander R. A. Anderson

We propose here a new model to describe biological invasions in the plane when a strong diffusion takes place on a line. We establish the main properties of the system, and also derive the asymptotic speed of spreading in the direction of…

Analysis of PDEs · Mathematics 2012-10-17 Henri Berestycki , Jean-Michel Roquejoffre , Luca Rossi

We study an individual based model describing competition in space between two different alleles. Although the model is similar in spirit to classic models of spatial population genetics such as the stepping stone model, here however space…

Populations and Evolution · Quantitative Biology 2015-03-20 Simone Pigolotti , Roberto Benzi , Prasad Perlekar Mogens H. Jensen , Federico Toschi , David R. Nelson

We report three-dimensional particle mechanics static calculations that predict the microstructure evolution during die-compaction of elastic spherical particles up to relative densities close to one. We employ a nonlocal contact…

Soft Condensed Matter · Physics 2016-08-03 Marcial Gonzalez , Alberto M. Cuitino

The rates at which individuals memorize and forget environmental information strongly influence their movement paths and long-term space use. To understand how these cognitive time scales shape population-level patterns, we propose and…

Analysis of PDEs · Mathematics 2026-02-19 Kyung-Han Choi , Thomas Hillen

We study a reaction-diffusion equation with an integral term describing nonlocal consumption of resources. We show that a homogeneous equilibrium can lose its stability resulting in appearance of stationary spatial structures. It is a new…

Analysis of PDEs · Mathematics 2007-05-23 Stephane Genieys , Vitaly Volpert , Pierre Auger

Biological systems are majorly dependent on their property of bistability in order to exhibit nongenetic heterogeneity in terms of cellular morphology and physiology. Spatial patterns of phenotypically heterogeneous cells, arising due to…

Quantitative Methods · Quantitative Biology 2023-01-25 Priya Chakraborty , Ushasi Roy , Mohit K. Jolly , Sayantari Ghosh

Self-arrangement of individuals into spatial patterns often accompanies and promotes species diversity in ecological systems. Here, we investigate pattern formation arising from cyclic dominance of three species, operating near a…

Populations and Evolution · Quantitative Biology 2008-08-31 Tobias Reichenbach , Erwin Frey

A new model to describe biological invasion influenced by a line with fast diffusion has been introduced by H. Berestycki, J.-M. Roquejoffre and L. Rossi in 2012.The purpose of this article is to present a related model where the line of…

Analysis of PDEs · Mathematics 2015-04-16 Antoine Pauthier

The distributions of species lifetimes and species in space are related, since species with good local survival chances have more time to colonize new habitats and species inhabiting large areas have higher chances to survive local…

Populations and Evolution · Quantitative Biology 2019-02-18 Tobias Rogge , David Jones , Barbara Drossel , Korinna T. Allhoff

We investigate the collective behavior of self-propelled particles (SPPs) undergoing competitive processes of pattern formation and rotational relaxation of their self-propulsion velocities. In full accordance with previous work, we observe…

Soft Condensed Matter · Physics 2016-11-08 A. I. Chervanyov , H. Gomez , U. Thiele

We propose a type-dependent branching model with mutation and competition for modeling phylogenies of a virus population. The competition kernel depends for any two virus particles on the particles' types, the total mass of the population…

Probability · Mathematics 2017-05-10 Sandra Kliem , Anita Winter

We consider a model for a population in a heterogeneous environment, with logistic type local population dynamics, under the assumption that individuals can switch between two different nonzero rates of diffusion. Such switching behavior…

Analysis of PDEs · Mathematics 2020-01-14 Robert Stephen Cantrell , Chris Cosner , Xiao Yu