Related papers: Steady state distributions in generalized exclusio…
Using the matrix product formalism we formulate a natural p-species generalization of the asymmetric simple exclusion process. In this model particles hop with their own specific rate and fast particles can overtake slow ones with a rate…
We find the formulas of the transition probabilities of the $N$-particle multi-species asymmetric simple exclusion processes (ASEP), and show that the transition probabilities are written as a determinant when the order of particles in the…
We propose and study a one-dimensional (1D) model consisting of two lanes with open boundaries. One of the lanes executes diffusive and the other lane driven unidirectional or asymmetric exclusion dynamics, which are mutually coupled…
We review various combinatorial interpretations and mappings of stationary-state probabilities of the totally asymmetric, partially asymmetric and symmetric simple exclusion processes (TASEP, PASEP, SSEP respectively). In these steady…
Non-equilibrium systems are often characterized by the transport of some quantity at a macroscopic scale, such as, for instance, a current of particles through a wire. The Asymmetric Simple Exclusion Process (ASEP) is a paradigm for…
We theoretically study the Totally Asymmetric Exclusion Process (TASEP) with quenched jumping rates disorder and finite lifetime chain. TASEP is widely used to model the translation of messenger RNAs by Ribosomes in protein synthesis. Since…
We investigate the stationary distribution of asymmetric and weakly asymmetric simple exclusion processes with open boundaries. We project the stationary distribution onto a subinterval, whose size is allowed to grow with the length of the…
The symmetric simple exclusion process (SEP), where diffusive particles cannot overtake each other, is a paradigmatic model of transport in the single-file geometry. In this model, the study of currents has attracted a lot of attention, but…
Research in combinatorics has often explored the asymmetric simple exclusion process (ASEP). The ASEP, inspired by examples from statistical mechanics, involves particles of various species moving around a lattice. With the traditional ASEP…
To mimic the complex transport-like collective phenomena in a man-made or natural system, we study an open network junction model of totally asymmetric simple exclusion process with bulk particle attachment and detachment. The stationary…
We consider a multi-species generalization of the Asymmetric Simple Exclusion Process on an open chain, in which particles hop with their characteristic hopping rates and fast particles can overtake slow ones. The number of species is…
Probabilistic Boolean Networks have been proposed for estimating the behaviour of dynamical systems as they combine rule-based modelling with uncertainty principles. Inferring PBNs directly from gene data is challenging however, especially…
The symmetric simple exclusion process (SEP) is a paradigmatic model of diffusion in a single-file geometry, in which the particles cannot cross. In this model, the study of currents have attracted a lot of attention. In particular, the…
The totally asymmetric simple exclusion process (TASEP), a well-known model in its strictly one-dimensional (chain) version, is generalized to cylinder (nanotube) and ribbon (nanoribbon) geometries. A mean-field theoretical description is…
Recently James Martin introduced multiline queues, and used them to give a combinatorial formula for the stationary distribution of the multispecies asymmetric simple exclusion exclusion process (ASEP) on a circle. The ASEP is a model of…
We show that in the asymmetric simple exclusion process (ASEP) on a ring, conditioned on carrying a large flux, the particle experience an effective long-range potential which in the limit of very large flux takes the simple form $U=…
Motor protein motion on biopolymers can be described by models related to the totally asymmetric simple exclusion process (TASEP). Inspired by experiments on the motion of kinesin-4 motors on antiparallel microtubule overlaps, we analyze a…
We study the nonequilibrium steady states in totally asymmetric exclusion processes (TASEP) with open boundary conditions having spatially inhomogeneous hopping rates. Considering smoothly varying hopping rates, we show that the steady…
Introduced in the late 1960's, the asymmetric exclusion process (ASEP) is an important model from statistical mechanics which describes a system of interacting particles hopping left and right on a one-dimensional lattice of n sites with…
The totally asymmetric simple exclusion process (TASEP) is a paradigmatic lattice model for one-dimensional particle transport subject to excluded-volume interactions. Solving the inhomogeneous TASEP in which particles' hopping rates vary…