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We present a constraint-based algorithm for learning causal structures from observational time-series data, in the presence of latent confounders. We assume a discrete-time, stationary structural vector autoregressive process, with both…

Artificial Intelligence · Computer Science 2023-06-02 Raanan Y. Rohekar , Shami Nisimov , Yaniv Gurwicz , Gal Novik

Modeling of longitudinal cohort data typically involves complex temporal dependencies between multiple variables. There, the transformer architecture, which has been highly successful in language and vision applications, allows us to…

This paper explores the potential of the transformer models for learning Granger causality in networks with complex nonlinear dynamics at every node, as in neurobiological and biophysical networks. Our study primarily focuses on a…

Machine Learning · Computer Science 2025-10-21 Ziyu Lu , Anika Tabassum , Shruti Kulkarni , Lu Mi , J. Nathan Kutz , Eric Shea-Brown , Seung-Hwan Lim

Learning structural information from observational data is central to producing new knowledge outside the training corpus. This holds for mechanistic understanding in scientific discovery as well as flexible test-time compositional…

Computation and Language · Computer Science 2026-01-27 Michelle Chao Chen , Moritz Miller , Bernhard Schölkopf , Siyuan Guo

Structured information resulting from temporal information processing is crucial for a variety of natural language processing tasks, for instance to generate timeline summarization of events from news documents, or to answer…

Computation and Language · Computer Science 2016-04-28 Paramita Mirza

Industry-wide nuclear power plant operating experience is a critical source of raw data for performing parameter estimations in reliability and risk models. Much operating experience information pertains to failure events and is stored as…

Computation and Language · Computer Science 2024-04-23 Shahidur Rahoman Sohag , Sai Zhang , Min Xian , Shoukun Sun , Fei Xu , Zhegang Ma

Knowing the effect of an intervention is critical for human decision-making, but current approaches for causal effect estimation rely on manual data collection and structuring, regardless of the causal assumptions. This increases both the…

Machine Learning · Computer Science 2024-10-29 Nikita Dhawan , Leonardo Cotta , Karen Ullrich , Rahul G. Krishnan , Chris J. Maddison

We present a novel approach to classify causal micro-narratives from text. These narratives are sentence-level explanations of the cause(s) and/or effect(s) of a target subject. The approach requires only a subject-specific ontology of…

Computation and Language · Computer Science 2024-11-12 Mourad Heddaya , Qingcheng Zeng , Chenhao Tan , Rob Voigt , Alexander Zentefis

We present a general logical framework for reasoning about agents' cognitive attitudes of both epistemic type and motivational type. We show that it allows us to express a variety of relevant concepts for qualitative decision theory…

Artificial Intelligence · Computer Science 2023-06-22 Emiliano Lorini

Languages vary widely in how meanings map to word forms. These mappings have been found to support efficient communication; however, this theory does not account for systematic relations within word forms. We examine how a restricted set of…

Computation and Language · Computer Science 2026-01-27 Doreen Osmelak , Yang Xu , Michael Hahn , Kate McCurdy

Understanding narratives requires reasoning about the cause-and-effect relationships between events mentioned in the text. While existing foundation models yield impressive results in many NLP tasks requiring reasoning, it is unclear…

Computation and Language · Computer Science 2023-11-09 Angelika Romanou , Syrielle Montariol , Debjit Paul , Leo Laugier , Karl Aberer , Antoine Bosselut

This paper describes how robust parsing techniques can be fruitful applied for building a query generation module which is part of a pipelined NLP architecture aimed at process natural language queries in a restricted domain. We want to…

Computation and Language · Computer Science 2007-05-23 Afzal Ballim , Vincenzo Pallotta

The training data of large language models (LLMs) comprises a wide range of biomedical literature, reflecting data from many different patient populations. We investigate how it might be possible to recover information on correlation and…

Machine Learning · Computer Science 2026-05-08 Fabian Kabus , Kian Kordtomeikel , Thomas Brox , Heinz Wiendl , Daiana Stolz , Harald Binder

Understanding texts requires memory: the reader has to keep in mind enough words to create meaning. This calls for a relation between the memory of the reader and the structure of the text. To investigate this interaction, we first identify…

Physics and Society · Physics 2007-05-23 E. Alvarez-Lacalle , B. Dorow , J. -P. Eckmann , E. Moses

The abilities of humans to understand the world in terms of cause and effect relationships, as well as to compress information into abstract concepts, are two hallmark features of human intelligence. These two topics have been studied in…

Machine Learning · Computer Science 2024-02-26 Kevin Xia , Elias Bareinboim

Large Language Models (LLMs) have demonstrated remarkable capabilities in various reasoning and generation tasks. However, their proficiency in complex causal reasoning, discovery, and estimation remains an area of active development, often…

Artificial Intelligence · Computer Science 2025-09-03 Adib Bazgir , Amir Habibdoust , Yuwen Zhang , Xing Song

Beneficial to advanced computing devices, models with massive parameters are increasingly employed to extract more information to enhance the precision in describing and predicting the patterns of objective systems. This phenomenon is…

Information Theory · Computer Science 2024-03-08 Liye Jia , Fengyufan Yang , Ka Lok Man , Erick Purwanto , Sheng-Uei Guan , Jeremy Smith , Yutao Yue

Natural language processing for programming aims to use NLP techniques to assist programming. It is increasingly prevalent for its effectiveness in improving productivity. Distinct from natural language, a programming language is highly…

Computation and Language · Computer Science 2023-08-08 Qingfu Zhu , Xianzhen Luo , Fang Liu , Cuiyun Gao , Wanxiang Che

Discourse structures are beneficial for various NLP tasks such as dialogue understanding, question answering, sentiment analysis, and so on. This paper presents a deep sequential model for parsing discourse dependency structures of…

Computation and Language · Computer Science 2018-12-04 Zhouxing Shi , Minlie Huang

Social and behavioral determinants of health (SBDoH) have important roles in shaping people's health. In clinical research studies, especially comparative effectiveness studies, failure to adjust for SBDoH factors will potentially cause…

Computation and Language · Computer Science 2021-08-12 Zehao Yu , Xi Yang , Chong Dang , Songzi Wu , Prakash Adekkanattu , Jyotishman Pathak , Thomas J. George , William R. Hogan , Yi Guo , Jiang Bian , Yonghui Wu
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