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Node similarity is a fundamental problem in graph analytics. However, node similarity between nodes in different graphs (inter-graph nodes) has not received a lot of attention yet. The inter-graph node similarity is important in learning a…

Databases · Computer Science 2016-02-17 Haohan Zhu , Xianrui Meng , George Kollios

The interleaving distance is arguably the most widely used metric in topological data analysis (TDA) due to its applicability to a wide array of inputs of interest, such as (multiparameter) persistence modules, Reeb graphs, merge trees, and…

Algebraic Topology · Mathematics 2026-01-15 Astrid A. Olave , Elizabeth Munch

Understanding what information neural networks capture is an essential problem in deep learning, and studying whether different models capture similar features is an initial step to achieve this goal. Previous works sought to define metrics…

Machine Learning · Computer Science 2020-07-27 Yunzhen Feng , Runtian Zhai , Di He , Liwei Wang , Bin Dong

Ordered sequences of data, specified with a join operation to combine sequences, serve as a foundation for the implementation of parallel functional algorithms. This abstract data type can be elegantly and efficiently implemented using…

Programming Languages · Computer Science 2023-09-26 Runming Li , Harrison Grodin , Robert Harper

Topological Data Analysis (TDA) is a rigorous framework that borrows techniques from geometric and algebraic topology, category theory, and combinatorics in order to study the "shape" of such complex high-dimensional data. Research in this…

Algebraic Topology · Mathematics 2022-04-15 R. W. R. Darling , John A. Emanuello , Emilie Purvine , Ahmad Ridley

The graph edit distance is used for comparing graphs in various domains. Due to its high computational complexity it is primarily approximated. Widely-used heuristics search for an optimal assignment of vertices based on the distance…

Data Structures and Algorithms · Computer Science 2023-12-08 Franka Bause , Christian Permann , Nils M. Kriege

Topological Data Analysis (TDA) can broadly be described as a collection of data analysis methods that find structure in data. This includes: clustering, manifold estimation, nonlinear dimension reduction, mode estimation, ridge estimation…

Methodology · Statistics 2016-09-28 Larry Wasserman

In this paper we study a new metric for comparing Betti numbers functions in bidimensional persistent homology, based on coherent matchings, i.e. families of matchings that vary in a continuous way. We prove some new results about this…

Algebraic Topology · Mathematics 2018-05-29 Andrea Cerri , Marc Ethier , Patrizio Frosini

We first consider interval partitions whose complements are Lebesgue-null and introduce a complete metric that induces the same topology as the Hausdorff distance (between complements). This is done using correspondences between intervals.…

Probability · Mathematics 2021-01-29 Noah Forman , Soumik Pal , Douglas Rizzolo , Matthias Winkel

Topological Data Analysis (TDA) provides powerful tools to explore the shape and structure of data through topological features such as clusters, loops, and voids. Persistence diagrams are a cornerstone of TDA, capturing the evolution of…

Artificial Intelligence · Computer Science 2026-03-13 Alexander Mironenko , Evgeny. Burnaev , Serguei Barannikov

We present a way to use Topological Data Analysis (TDA) for machine learning tasks on grayscale images. We apply persistent homology to generate a wide range of topological features using a point cloud obtained from an image, its natural…

Machine Learning · Computer Science 2019-10-23 Adélie Garin , Guillaume Tauzin

This paper introduces the induced matching distance, a novel topological metric designed to compare discrete structures represented by a symmetric non-negative function. We apply this notion to analyze agent trajectories over time. We use…

Algebraic Topology · Mathematics 2025-02-18 Javier Perera-Lago , Álvaro Torras-Casas , Jérôme Guzzi , Rocio Gonzalez-Diaz

Topological Data Analysis (TDA) is a novel statistical technique, particularly powerful for the analysis of large and high dimensional data sets. Much of TDA is based on the tool of persistent homology, represented visually via persistence…

Applications · Statistics 2017-11-07 Sarit Agami , Robert J. Adler

In this paper we study functions on the interval that have the same persistent homology. By introducing an equivalence relation modeled after topological conjugacy, which we call graph-equivalence, a precise enumeration of functions with…

Algebraic Topology · Mathematics 2019-01-23 Justin Curry

In this paper, we study the induced homological sequence and the induced merge tree of a discrete Morse function on a tree. A discrete Morse function on a tree gives rise to a sequence of Betti numbers that keep track of the number of…

General Mathematics · Mathematics 2024-10-31 Nicholas A. Scoville , Dylan Wen

Topological data analysis (TDA) provides insight into data shape. The summaries obtained by these methods are principled global descriptions of multi-dimensional data whilst exhibiting stable properties such as robustness to deformation and…

Machine Learning · Computer Science 2024-03-18 Ali Zia , Abdelwahed Khamis , James Nichols , Zeeshan Hayder , Vivien Rolland , Lars Petersson

Index structures are one of the most important tools that DBAs leverage to improve the performance of analytics and transactional workloads. However, building several indexes over large datasets can often become prohibitive and consume…

Databases · Computer Science 2020-03-26 Alex Galakatos , Michael Markovitch , Carsten Binnig , Rodrigo Fonseca , Tim Kraska

We present a dynamic data structure for representing a graph $G$ with tree-depth at most $D$. Tree-depth is an important graph parameter which arose in the study of sparse graph classes. The structure allows addition and removal of edges…

Data Structures and Algorithms · Computer Science 2013-07-11 Zdenek Dvorak , Martin Kupec , Vojtech Tuma

The Euler Characteristic Transform (ECT) is a robust method for shape classification. It takes an embedded shape and, for each direction, computes a piecewise constant function representing the Euler Characteristic of the shape's sublevel…

Computational Geometry · Computer Science 2025-06-26 Jasmine George , Oscar Lledo Osborn , Elizabeth Munch , Messiah Ridgley , Elena Xinyi Wang

Interacting, self-propelled particles such as epithelial cells can dynamically self-organize into complex multicellular patterns, which are challenging to classify without a priori information. Classically, different phases and phase…

Quantitative Methods · Quantitative Biology 2021-01-19 Dhananjay Bhaskar , William Y. Zhang , Ian Y. Wong
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