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Graph-based clustering plays an important role in the clustering area. Recent studies about graph convolution neural networks have achieved impressive success on graph type data. However, in general clustering tasks, the graph structure of…

Machine Learning · Computer Science 2024-04-23 Xuelong Li , Hongyuan Zhang , Rui Zhang

Graph-to-text generation has benefited from pre-trained language models (PLMs) in achieving better performance than structured graph encoders. However, they fail to fully utilize the structure information of the input graph. In this paper,…

Computation and Language · Computer Science 2025-06-11 Qingyun Wang , Semih Yavuz , Victoria Lin , Heng Ji , Nazneen Rajani

Graphs are ubiquitous data structures for representing interactions between entities. With an emphasis on the use of graphs to represent chemical molecules, we explore the task of learning to generate graphs that conform to a distribution…

Machine Learning · Computer Science 2019-03-08 Qi Liu , Miltiadis Allamanis , Marc Brockschmidt , Alexander L. Gaunt

Speculative decoding has been widely used to accelerate auto-regressive (AR) text generation. However, its effectiveness for visual AR models remains limited due to token selection ambiguity, where multiple tokens share similarly low…

Computer Vision and Pattern Recognition · Computer Science 2025-03-28 Sihwan Park , Doohyuk Jang , Sungyub Kim , Souvik Kundu , Eunho Yang

Transformer networks are the de facto standard architecture in natural language processing. To date, there are no theoretical analyses of the Transformer's ability to capture tree structures. We focus on the ability of Transformer networks…

Computation and Language · Computer Science 2021-12-23 Qi He , João Sedoc , Jordan Rodu

Computational predictions of mass spectra from molecules have enabled the discovery of clinically relevant metabolites. However, such predictive tools are still limited as they occupy one of two extremes, either operating (a) by fragmenting…

Quantitative Methods · Quantitative Biology 2023-12-05 Samuel Goldman , John Bradshaw , Jiayi Xin , Connor W. Coley

We propose Tree Variational Autoencoder (TreeVAE), a new generative hierarchical clustering model that learns a flexible tree-based posterior distribution over latent variables. TreeVAE hierarchically divides samples according to their…

Machine Learning · Computer Science 2023-11-20 Laura Manduchi , Moritz Vandenhirtz , Alain Ryser , Julia Vogt

The theory of sparse structures usually uses tree like structures as building blocks. In the context of sparse/dense dichotomy this role is played by graphs with bounded tree depth. In this paper we survey results related to this concept…

Combinatorics · Mathematics 2016-08-09 Jaroslav Nesetril , Patrice Ossona De Mendez

Recent techniques such as retrieval-augmented generation or chain-of-thought reasoning have led to longer contexts and increased inference costs. Context compression techniques can reduce these costs, but the most effective approaches…

Computation and Language · Computer Science 2025-10-24 Hippolyte Pilchen , Edouard Grave , Patrick Pérez

Translation-based AMR parsers have recently gained popularity due to their simplicity and effectiveness. They predict linearized graphs as free texts, avoiding explicit structure modeling. However, this simplicity neglects structural…

Computation and Language · Computer Science 2023-10-19 Chao Lou , Kewei Tu

Tree-structured neural networks encode a particular tree geometry for a sentence in the network design. However, these models have at best only slightly outperformed simpler sequence-based models. We hypothesize that neural sequence models…

Computation and Language · Computer Science 2015-11-10 Samuel R. Bowman , Christopher D. Manning , Christopher Potts

Generating graphs from a target distribution is a significant challenge across many domains, including drug discovery and social network analysis. In this work, we introduce a novel graph generation method leveraging $K^2$-tree…

Machine Learning · Computer Science 2024-03-27 Yunhui Jang , Dongwoo Kim , Sungsoo Ahn

Autoregressive (AR) image models achieve diffusion-level quality but suffer from sequential inference, requiring approximately 2,000 steps for a 576x576 image. Speculative decoding with draft trees accelerates LLMs yet underperforms on…

Computer Vision and Pattern Recognition · Computer Science 2025-12-29 Haodong Lei , Hongsong Wang , Xin Geng , Liang Wang , Pan Zhou

Incorporating hierarchical structures like constituency trees has been shown to be effective for various natural language processing (NLP) tasks. However, it is evident that state-of-the-art (SOTA) sequence-based models like the Transformer…

Machine Learning · Computer Science 2020-02-20 Xuan-Phi Nguyen , Shafiq Joty , Steven C. H. Hoi , Richard Socher

Different from other sequential data, sentences in natural language are structured by linguistic grammars. Previous generative conversational models with chain-structured decoder ignore this structure in human language and might generate…

Artificial Intelligence · Computer Science 2018-01-04 Ganbin Zhou , Ping Luo , Rongyu Cao , Yijun Xiao , Fen Lin , Bo Chen , Qing He

Large language models (LM) based on Transformers allow to generate plausible long texts. In this paper, we explore how this generation can be further controlled at decoding time to satisfy certain constraints (e.g. being non-toxic,…

Computation and Language · Computer Science 2022-05-05 Antoine Chaffin , Vincent Claveau , Ewa Kijak

Meaning Representations (AMRs) are broad-coverage sentence-level semantic graphs. Existing approaches to generating text from AMR have focused on training sequence-to-sequence or graph-to-sequence models on AMR annotated data only. In this…

Computation and Language · Computer Science 2020-05-28 Manuel Mager , Ramon Fernandez Astudillo , Tahira Naseem , Md Arafat Sultan , Young-Suk Lee , Radu Florian , Salim Roukos

We focus on graph-to-sequence learning, which can be framed as transducing graph structures to sequences for text generation. To capture structural information associated with graphs, we investigate the problem of encoding graphs using…

Computation and Language · Computer Science 2019-09-10 Zhijiang Guo , Yan Zhang , Zhiyang Teng , Wei Lu

Sequence-to-sequence models are widely used to train Abstract Meaning Representation (Banarescu et al., 2013, AMR) parsers. To train such models, AMR graphs have to be linearized into a one-line text format. While Penman encoding is…

Computation and Language · Computer Science 2025-05-14 Jeongwoo Kang , Maximin Coavoux , Cédric Lopez , Didier Schwab

Most of modern neural machine translation (NMT) models are based on an encoder-decoder framework with an attention mechanism. While they perform well on standard datasets, they can have trouble in translation of long inputs that are rare or…

Computation and Language · Computer Science 2026-03-31 Shuhei Kondo , Katsuhito Sudoh , Yuji Matsumoto
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