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Automatic methods for measuring normalized regional brain volumes from MRI data are a key tool to help in the objective diagnostic and follow-up of many neurological diseases. To estimate such regional brain volumes, the intracranial cavity…

Health professionals extensively use Two- Dimensional (2D) Ultrasound (US) videos and images to visualize and measure internal organs for various purposes including evaluation of muscle architectural changes. US images can be used to…

Image and Video Processing · Electrical Eng. & Systems 2021-10-01 Alzayat Saleh , Issam H. Laradji , Corey Lammie , David Vazquez , Carol A Flavell , Mostafa Rahimi Azghadi

Prostate biopsies are mainly performed under 2D TransRectal UltraSound (TRUS) control by sampling the prostate according to a predefined pattern. In case of first biopsies, this pattern follows a random systematic plan. Sometimes, repeat…

Other Computer Science · Computer Science 2008-01-28 Pierre Mozer , Michael Baumann , G. Chevreau , Vincent Daanen , Alexandre Moreau-Gaudry , Jocelyne Troccaz

Accurately predicting and detecting interstitial lung disease (ILD) patterns given any computed tomography (CT) slice without any pre-processing prerequisites, such as manually delineated regions of interest (ROIs), is a clinically…

Computer Vision and Pattern Recognition · Computer Science 2017-01-23 Mingchen Gao , Ziyue Xu , Le Lu , Adam P. Harrison , Ronald M. Summers , Daniel J. Mollura

2D single-slice abdominal computed tomography (CT) enables the assessment of body habitus and organ health with low radiation exposure. However, single-slice data necessitates the use of 2D networks for segmentation, but these networks…

We present an approach for fully automatic urinary bladder segmentation in CT images with artificial neural networks in this study. Automatic medical image analysis has become an invaluable tool in the different treatment stages of…

Computer Vision and Pattern Recognition · Computer Science 2019-03-08 Christina Gsaxner , Peter M. Roth , Jürgen Wallner , Jan Egger

There has been a debate on whether to use 2D or 3D deep neural networks for volumetric organ segmentation. Both 2D and 3D models have their advantages and disadvantages. In this paper, we present an alternative framework, which trains 2D…

Computer Vision and Pattern Recognition · Computer Science 2018-06-12 Yingda Xia , Lingxi Xie , Fengze Liu , Zhuotun Zhu , Elliot K. Fishman , Alan L. Yuille

Background: Conventional cardiovascular magnetic resonance (CMR) in paediatric and congenital heart disease uses 2D, breath-hold, balanced steady state free precession (bSSFP) cine imaging for assessment of function and cardiac-gated,…

Image and Video Processing · Electrical Eng. & Systems 2025-07-01 Mark Wrobel , Michele Pascale , Tina Yao , Ruaraidh Campbell , Elena Milano , Michael Quail , Jennifer Steeden , Vivek Muthurangu

Semantic image segmentation plays an important role in modeling patient-specific anatomy. We propose a convolution neural network, called Kid-Net, along with a training schema to segment kidney vessels: artery, vein and collecting system.…

Computer Vision and Pattern Recognition · Computer Science 2018-06-19 Ahmed Taha , Pechin Lo , Junning Li , Tao Zhao

We systematically evaluate a Deep Learning (DL) method in a 3D medical image segmentation task. Our segmentation method is integrated into the radiosurgery treatment process and directly impacts the clinical workflow. With our method, we…

Image and Video Processing · Electrical Eng. & Systems 2021-08-24 Boris Shirokikh , Alexandra Dalechina , Alexey Shevtsov , Egor Krivov , Valery Kostjuchenko , Amayak Durgaryan , Mikhail Galkin , Andrey Golanov , Mikhail Belyaev

Thyroid cancer is among the most common cancers in the United States. Thyroid nodules are frequently detected through ultrasound (US) imaging, and some require further evaluation via fine-needle aspiration (FNA) biopsy. Despite its…

Objective: Molecular testing (MT) classifies cytologically indeterminate thyroid nodules as benign or malignant with high sensitivity but low positive predictive value (PPV), only using molecular profiles, ignoring ultrasound (US) imaging…

Automatic segmentation of vestibular schwannoma (VS) tumors from magnetic resonance imaging (MRI) would facilitate efficient and accurate volume measurement to guide patient management and improve clinical workflow. The accuracy and…

Image and Video Processing · Electrical Eng. & Systems 2019-10-22 Guotai Wang , Jonathan Shapey , Wenqi Li , Reuben Dorent , Alex Demitriadis , Sotirios Bisdas , Ian Paddick , Robert Bradford , Sebastien Ourselin , Tom Vercauteren

Intervertebral discs (IVDs), as small joints lying between adjacent vertebrae, have played an important role in pressure buffering and tissue protection. The fully-automatic localization and segmentation of IVDs have been discussed in the…

Image and Video Processing · Electrical Eng. & Systems 2020-09-30 Chuanbo Wang , Ye Guo , Wei Chen , Zeyun Yu

Thyroid cancer is common worldwide, with a rapid increase in prevalence across North America in recent years. While most patients present with palpable nodules through physical examination, a large number of small and medium-sized nodules…

Image and Video Processing · Electrical Eng. & Systems 2020-06-11 Fatemeh Abdolali , Atefeh Shahroudnejad , Abhilash Rakkunedeth Hareendranathan , Jacob L Jaremko , Michelle Noga , Kumaradevan Punithakumar

Background and purpose: The delineation of the gross tumor volume (GTV) is a critical step for radiation therapy treatment planning. The delineation procedure is typically performed manually which exposes two major issues: cost and…

Uncertainty of labels in clinical data resulting from intra-observer variability can have direct impact on the reliability of assessments made by deep neural networks. In this paper, we propose a method for modelling such uncertainty in the…

It remains challenging to automatically segment kidneys in clinical ultrasound images due to the kidneys' varied shapes and image intensity distributions, although semi-automatic methods have achieved promising performance. In this study,…

Computer Vision and Pattern Recognition · Computer Science 2019-01-09 Shi Yin , Zhengqiang Zhang , Hongming Li , Qinmu Peng , Xinge You , Susan L. Furth , Gregory E. Tasian , Yong Fan

Deep learning has shown to be effective for depth inference in multi-view stereo (MVS). However, the scalability and accuracy still remain an open problem in this domain. This can be attributed to the memory-consuming cost volume…

Computer Vision and Pattern Recognition · Computer Science 2019-12-30 Qingshan Xu , Wenbing Tao

Neuroimaging to neuropathology correlation (NTNC) promises to enable the transfer of microscopic signatures of pathology to in vivo imaging with MRI, ultimately enhancing clinical care. NTNC traditionally requires a volumetric MRI scan,…

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