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Cancer is a disease of cellular regulation, often initiated by genetic mutation within cells, and leading to a heterogeneous cell population within tissues. In the competition for nutrients and growth space within the tumors the phenotype…

Populations and Evolution · Quantitative Biology 2017-08-08 András Szabó , Roeland M. H. Merks

This paper is concerned with a multi-dimensional free boundary problem modeling the growth of a tumor with two species of cells: proliferating cells and quiescent cells. This free boundary problem has a unique radial stationary solution. By…

Analysis of PDEs · Mathematics 2015-06-17 Shangbin Cui

When beneficial mutations are relatively common, competition between multiple unfixed mutations can reduce the rate of fixation in well-mixed asexual populations. We introduce a one dimensional model with a steady accumulation of beneficial…

Populations and Evolution · Quantitative Biology 2013-02-19 Jakub Otwinowski , Stefan Boettcher

We develop a modeling framework for cancer progression that distinguishes the order of two possible mutations. Recent observations and information on myeloproliferative neoplasms are analyzed within our framework. In some patients with…

Molecular Networks · Quantitative Biology 2026-05-12 Yue Wang , Blerta Shtylla , Tom Chou

Unstable dynamics characterizes the evolution of most solid tumors. Because of an increased failure of maintaining genome integrity, a cumulative increase in the levels of gene mutation and loss is observed. Previous work suggests that…

Biological Physics · Physics 2015-06-18 Daniel R. Amor , Ricard V. Solé

Multicolor cell spatio-temporal image data have become important to investigate organ development and regeneration, malignant growth or immune responses by tracking different cell types both in vivo and in vitro. Statistical modeling of…

Methodology · Statistics 2018-04-11 Puxue Qiao , Christina Mølck , Davide Ferrari , Frédéric Hollande

We argue that volumetric growth dynamics of a solid cancer depend on the tumor system's overall surface extension. While this at first may seem evident, to our knowledge, so far no theoretical argument has been presented explaining this…

Tissues and Organs · Quantitative Biology 2007-05-23 Thomas S. Deisboeck , Caterina Guiot , Pier Paolo Delsanto , Nicola Pugno

Cancer development is a multistep process often starting with a single cell in which a number of epigenetic and genetic alterations have accumulated thus transforming it into a tumor cell. The progeny of such a single benign tumor cell…

Tissues and Organs · Quantitative Biology 2022-09-21 Steffen Lange , Richard Mogwitz , Denis Hünniger , Anja Voss-Böhme

The aim of this article is to study the impact of resistance acquisition on the distribution of neutral mutations in a cell population under therapeutic pressure. The cell population is modeled by a bi-type branching process. Initially, the…

Probability · Mathematics 2023-04-25 Céline Bonnet , Hélène Leman

A general model for the ontogenetic growth of living organisms has been recently proposed. Here we investigate the extension of this model to the growth of solid malignant tumors. A variety of in vitro and in vivo data are analyzed and…

The evolution of dispersal rate is studied with a model of several local populations linked by dispersal. Three dispersal strategies are considered where all, half, or none of the offspring disperse. The spatial scale (number of patches)…

Populations and Evolution · Quantitative Biology 2019-03-12 Emmanuel Paradis

Background: Analysing tumour architecture for metastatic potential usually focuses on phenotypic differences due to cellular morphology or specific genetic mutations, but often ignore the cell's position within the heterogeneous…

Populations and Evolution · Quantitative Biology 2015-01-23 Artem Kaznatcheev , Jacob G. Scott , David Basanta

The dynamics of tumour evolution are not well understood. In this paper we provide a statistical framework for evaluating the molecular variation observed in different parts of a colorectal tumour. A multi-sample version of the Ewens…

Populations and Evolution · Quantitative Biology 2010-04-26 A. D. Barbour , Simon Tavaré

Cancers follow a clonal Darwinian evolution, with fitter subclones replacing more quiescent cells, ultimately giving rise to macroscopic disease. High-throughput genomics provides the opportunity to investigate these processes and determine…

Quantitative Methods · Quantitative Biology 2014-10-07 Sakellarios Zairis , Hossein Khiabanian , Andrew J. Blumberg , Raul Rabadan

The spatial distribution of persistent (unvisited) sites in one dimensional $A+A\to\emptyset$ model is studied. The `empty interval distribution' $n(k,t)$, which is the probability that two consecutive persistent sites are separated by…

Statistical Mechanics · Physics 2007-05-23 G. Manoj , P. Ray

The forest of mutations associated to a multitype branching forest is obtained by merging together all vertices of its clusters and by preserving connections between them. We first show that the forest of mutations of any mulitype branching…

Probability · Mathematics 2015-10-06 Loïc Chaumont , Thi Ngoc Anh Nguyen

The work presents a study of the non-linear mathematical model of tumor growth, proposed by Kolev and Zubik-Kowal (2011). The model is described by a system composed of four partial differential equations that represent the evolution of the…

Tissues and Organs · Quantitative Biology 2025-06-02 Jesika Maganin , Neyva Maria Lopes Romeiro , Eliandro Rodrigues Cirilo , Paulo Laerte Natti

Although somatic mutations are the main contributor to cancer, underlying germline alterations may increase the risk of cancer, mold the somatic alteration landscape and cooperate with acquired mutations to promote the tumor onset and/or…

Quantitative Methods · Quantitative Biology 2016-11-01 Jorge Fernandez-de-Cossio , Yasser Perera

In the present article we demonstrate a new hybrid model of tumor growth. Our model is stochastic by tumor population development and strongly deterministic in cell motility dynamics and spatial propagation. In addition, it has excellent…

Other Quantitative Biology · Quantitative Biology 2017-05-03 Yehor Surkov , Ihor Samofalov , Mironenko Anastasia

Recent studies at individual cell resolution have revealed phenotypic heterogeneity in nominally clonal tumor cell populations. The heterogeneity affects cell growth behaviors, which can result in departure from the idealized uniform…

Populations and Evolution · Quantitative Biology 2023-10-20 Yue Wang , Joseph X. Zhou , Edoardo Pedrini , Irit Rubin , May Khalil , Roberto Taramelli , Hong Qian , Sui Huang