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The way for performing multiple sequence alignment is based on the criterion of the maximum scored information content computed from a weight matrix, but it is possible to have two or more alignments to have the same highest score leading…

Quantitative Methods · Quantitative Biology 2014-03-03 Jian-Jun Shu , Kian Yan Yong , Weng Kong Chan

Estimating a constrained relation is a fundamental problem in machine learning. Special cases are classification (the problem of estimating a map from a set of to-be-classified elements to a set of labels), clustering (the problem of…

Machine Learning · Computer Science 2014-08-06 Lizhen Qu , Bjoern Andres

Accurate calibration of probabilistic predictive models learned is critical for many practical prediction and decision-making tasks. There are two main categories of methods for building calibrated classifiers. One approach is to develop…

Machine Learning · Statistics 2014-01-16 Mahdi Pakdaman Naeini , Gregory F. Cooper , Milos Hauskrecht

In natural language processing (NLP), the semantic similarity task requires large-scale, high-quality human-annotated labels for fine-tuning or evaluation. By contrast, in cases of music similarity, such labels are expensive to collect and…

Sound · Computer Science 2021-09-10 Xinran Zhang , Maosong Sun , Jiafeng Liu , Xiaobing Li

Calibrating a multiclass predictor, that outputs a distribution over labels, is particularly challenging due to the exponential number of possible prediction values. In this work, we propose a new definition of calibration error that…

Machine Learning · Computer Science 2025-09-30 Konstantina Bairaktari , Huy L. Nguyen

We consider learning to optimize a classification metric defined by a black-box function of the confusion matrix. Such black-box learning settings are ubiquitous, for example, when the learner only has query access to the metric of…

Machine Learning · Computer Science 2021-06-25 Gaurush Hiranandani , Jatin Mathur , Harikrishna Narasimhan , Mahdi Milani Fard , Oluwasanmi Koyejo

Classifier calibration does not always go hand in hand with the classifier's ability to separate the classes. There are applications where good classifier calibration, i.e. the ability to produce accurate probability estimates, is more…

Machine Learning · Computer Science 2020-05-26 Tuomo Alasalmi , Jaakko Suutala , Heli Koskimäki , Juha Röning

Binary Classification plays an important role in machine learning. For linear classification, SVM is the optimal binary classification method. For nonlinear classification, the SVM algorithm needs to complete the classification task by…

Machine Learning · Computer Science 2024-06-21 Pengbo Yang , Jian Yu

Uncertainty sampling in active learning is heavily used in practice to reduce the annotation cost. However, there has been no wide consensus on the function to be used for uncertainty estimation in binary classification tasks and…

Machine Learning · Computer Science 2021-11-01 Anant Raj , Francis Bach

We propose an algorithm named best-scored random forest for binary classification problems. The terminology "best-scored" means to select the one with the best empirical performance out of a certain number of purely random tree candidates…

Machine Learning · Statistics 2019-05-28 Hanyuan Hang , Xiaoyu Liu , Ingo Steinwart

We explore the role of group symmetries in binary classification tasks, presenting a novel framework that leverages the principles of Neyman-Pearson optimality. Contrary to the common intuition that larger symmetry groups lead to improved…

Machine Learning · Computer Science 2024-08-19 Vishal S. Ngairangbam , Michael Spannowsky

We consider the NP-hard problem of MAP-inference for undirected discrete graphical models. We propose a polynomial time and practically efficient algorithm for finding a part of its optimal solution. Specifically, our algorithm marks some…

Computer Vision and Pattern Recognition · Computer Science 2017-02-06 Alexander Shekhovtsov , Paul Swoboda , Bogdan Savchynskyy

This paper considers the task of linear regression with shuffled labels, i.e., $\mathbf Y = \mathbf \Pi \mathbf X \mathbf B + \mathbf W$, where $\mathbf Y \in \mathbb R^{n\times m}, \mathbf Pi \in \mathbb R^{n\times n}, \mathbf X\in \mathbb…

Machine Learning · Statistics 2023-10-03 Hang Zhang , Ping Li

In many classification problems it is desirable to output well-calibrated probabilities on the different classes. We propose a robust, non-parametric method of calibrating probabilities called SplineCalib that utilizes smoothing splines to…

Machine Learning · Statistics 2018-09-21 Brian Lucena

For the problem of binary linear classification and feature selection, we propose algorithmic approaches to classifier design based on the generalized approximate message passing (GAMP) algorithm, recently proposed in the context of…

Information Theory · Computer Science 2015-06-18 Justin Ziniel , Philip Schniter , Per Sederberg

Deep neural networks often produce miscalibrated probability estimates, leading to overconfident predictions. A common approach for calibration is fitting a post-hoc calibration map on unseen validation data that transforms predicted…

Machine Learning · Computer Science 2025-07-10 Yunrui Zhang , Gustavo Batista , Salil S. Kanhere

We formulate the problem of performing optimal data compression under the constraints that compressed data can be used for accurate classification in machine learning. We show that this translates to a problem of minimizing the mutual…

Signal Processing · Electrical Eng. & Systems 2022-11-04 Jingchao Gao , Ao Tang , Weiyu Xu

Multiclass problems are often decomposed into multiple binary problems that are solved by individual binary classifiers whose results are integrated into a final answer. Various methods, including all-pairs (APs), one-versus-all (OVA), and…

Machine Learning · Computer Science 2014-01-17 Sunho Park , TaeHyun Hwang , Seungjin Choi

The fundamental theorem of statistical learning states that for binary classification problems, any Empirical Risk Minimization (ERM) learning rule has close to optimal sample complexity. In this paper we seek for a generic optimal learner…

Machine Learning · Computer Science 2014-05-13 Amit Daniely , Shai Shalev-Shwartz

The optimal binning is the optimal discretization of a variable into bins given a discrete or continuous numeric target. We present a rigorous and extensible mathematical programming formulation for solving the optimal binning problem for a…

Machine Learning · Computer Science 2022-12-12 Guillermo Navas-Palencia