English
Related papers

Related papers: Learning System Parameters from Turing Patterns

200 papers

Spatio-temporal patterns emerging from an initial quiescent, uniform state is a phenomenon observed in many dynamical systems sustained far from thermodynamic equilibrium, the practical application of which has only recently begun to be…

Pattern Formation and Solitons · Physics 2026-02-05 Vinod Ramakrishnan , Michael J. Frazier

Turing mechanisms can yield a large variety of patterns from noisy, homogenous initial conditions and have been proposed as patterning mechanism for many developmental processes. However, the molecular components that give rise to Turing…

Molecular Networks · Quantitative Biology 2015-06-22 Tamás Kurics , Denis Menshykau , Dagmar Iber

With the development of network science, Turing pattern has been proven to be formed in discrete media such as complex networks, opening up the possibility of exploring it as a generation mechanism in the context of biology, chemistry, and…

Populations and Evolution · Quantitative Biology 2023-10-05 Yong Ye , Jiaying Zhou

Spatial distribution of the human population is distinctly heterogeneous, e.g. showing significant difference in the population density between urban and rural areas. In the historical perspective, i.e. on the timescale of centuries, the…

Adaptation and Self-Organizing Systems · Physics 2022-08-30 Anna Zincenko , Sergei Petrovskii , Vitaly Volpert

Herding defines a deterministic dynamical system at the edge of chaos. It generates a sequence of model states and parameters by alternating parameter perturbations with state maximizations, where the sequence of states can be interpreted…

Machine Learning · Statistics 2016-03-02 Yutian Chen , Max Welling

We study the onset of spatial instabilities in reaction networks where the spatially homogeneous system admits a steady state parameterization. We formulate a sufficient condition -- based on the signs of the constant and leading…

Dynamical Systems · Mathematics 2026-05-18 Carsten Conradi , Maya Mincheva , Hannes Uecker

We hereby develop the theory of Turing instability for reaction-diffusion systems defined on m-directed hypergraphs, the latter being generalization of hypergraphs where nodes forming hyperedges can be shared into two disjoint sets, the…

Pattern Formation and Solitons · Physics 2025-10-22 Marie Dorchain , Wilfried Segnou , Riccardo Muolo , Timoteo Carletti

We consider a class of systems with time-varying parameters, which are written as linear regressions with bounded disturbances. The task is to estimate such parameters under the condition that the regressor is finitely exciting (FE).…

Systems and Control · Electrical Eng. & Systems 2021-11-24 Anton Glushchenko , Konstantin Lastochkin

Originating from the pioneering study of Alan Turing, the bifurcation analysis predicting spatial pattern formation from a spatially uniform state for diffusing morphogens or chemical species that interact through nonlinear reactions is a…

Pattern Formation and Solitons · Physics 2023-01-18 Merlin Pelz , Michael J. Ward

This paper explores learning emulators for parameter estimation with uncertainty estimation of high-dimensional dynamical systems. We assume access to a computationally complex simulator that inputs a candidate parameter and outputs a…

Machine Learning · Computer Science 2022-11-04 Ruoxi Jiang , Rebecca Willett

Given a segment of time series of a system at a particular set of parameter values, can one infers the global behavior of the system in its parameter space? Here we show that by using a learning machine we can achieve such a goal to a…

Adaptation and Self-Organizing Systems · Physics 2022-04-15 Hong Zhao

We study the invariance characteristics of pre-trained predictive models by empirically learning transformations on the input that leave the prediction function approximately unchanged. To learn invariant transformations, we minimize the…

Machine Learning · Computer Science 2020-03-04 Mohammad Taha Bahadori , Layne C. Price

In this article a novel approach for training deep neural networks using Bayesian techniques is presented. The Bayesian methodology allows for an easy evaluation of model uncertainty and additionally is robust to overfitting. These are…

Machine Learning · Computer Science 2019-04-03 Konstantin Posch , Jürgen Pilz

Human trajectory forecasting is a critical challenge in fields such as robotics and autonomous driving. Due to the inherent uncertainty of human actions and intentions in real-world scenarios, various unexpected occurrences may arise. To…

Computer Vision and Pattern Recognition · Computer Science 2024-01-09 Yuxin Yang , Pengfei Zhu , Mengshi Qi , Huadong Ma

Pattern formation in clouds is a well-known feature, which can be observed almost every day. However, the guiding processes for structure formation are mostly unknown, and also theoretical investigations of cloud patterns are quite rare.…

Dynamical Systems · Mathematics 2021-01-06 Juliane Rosemeier , Peter Spichtinger

Accurately determining the underlying physical parameters of individual elements in integrated photonics is increasingly difficult as device architectures become more complex. Inferring these parameters directly from spectral measurements…

This paper considers the problem of regression over distributions, which is becoming increasingly important in machine learning. Existing approaches often ignore the geometry of the probability space or are computationally expensive. To…

Machine Learning · Computer Science 2025-10-31 Maksim Maslov , Alexander Kugaevskikh , Matthew Ivanov

The Turing instability paradigm is revisited in the context of a multispecies diffusion scheme derived from a self-consistent microscopic formulation. The analysis is developed with reference to the case of two species. These latter share…

Biological Physics · Physics 2012-07-02 Duccio Fanelli , Claudia Cianci , Francesca Di Patti

Steady state is an essential concept in reaction networks. Its stability reflects fundamental characteristics of several biological phenomena such as cellular signal transduction and gene expression. Because biochemical reactions occur at…

Molecular Networks · Quantitative Biology 2019-04-19 Tan Van Vu , Yoshihiko Hasegawa

Recent genomic and bioinformatic advances have motivated the development of numerous random network models purporting to describe graphs of biological, technological, and sociological origin. The success of a model has been evaluated by how…

Molecular Networks · Quantitative Biology 2007-05-23 Manuel Middendorf , Etay Ziv , Carter Adams , Jen Hom , Robin Koytcheff , Chaya Levovitz , Gregory Woods , Linda Chen , Chris Wiggins