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Accurate forecasts of COVID-19 is central to resource management and building strategies to deal with the epidemic. We propose a heterogeneous infection rate model with human mobility for epidemic modeling, a preliminary version of which we…

Populations and Evolution · Quantitative Biology 2020-05-06 Ajitesh Srivastava , Viktor K. Prasanna

We should be in a golden age of scientific discovery, given that we have more data and more compute power available than ever before, plus a new generation of algorithms that can learn effectively from data. But paradoxically, in many…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-06-26 Niall H. Robinson , Joe Hamman , Ryan Abernathey

The COVID-19 pandemic has created unprecedented challenges worldwide. Strained healthcare providers make difficult decisions on patient triage, treatment and care management on a daily basis. Policy makers have imposed social distancing…

The COVID-19 pandemic has brought forth the importance of epidemic forecasting for decision makers in multiple domains, ranging from public health to the economy as a whole. While forecasting epidemic progression is frequently…

Machine Learning · Computer Science 2022-07-21 Alexander Rodríguez , Harshavardhan Kamarthi , Pulak Agarwal , Javen Ho , Mira Patel , Suchet Sapre , B. Aditya Prakash

Downsizing the US public health workforce throughout 2025 amplifies potential risks during public health crises. Expert judgment from public health officials represents a vital information source, distinct from traditional surveillance…

Populations and Evolution · Quantitative Biology 2025-08-22 Garrik Hoyt , Eleanor Bergren , Gabrielle String , Thomas McAndrew

COVID-19 has spread all over the world, having an enormous effect on our daily life and work. In response to the epidemic, a lot of important decisions need to be taken to save communities and economies worldwide. Data clearly plays a vital…

Social and Information Networks · Computer Science 2022-02-24 Shuo Yu , Qing Qing , Chen Zhang , Ahsan Shehzad , Giles Oatley , Feng Xia

In recent years, the data science community has pursued excellence and made significant research efforts to develop advanced analytics, focusing on solving technical problems at the expense of organizational and socio-technical challenges.…

Databases · Computer Science 2022-01-19 Iñigo Martinez , Elisabeth Viles , Igor G. Olaizola

Severe acute respiratory disease SARS-CoV-2 has had a found impact on public health systems and healthcare emergency response especially with respect to making decisions on the most effective measures to be taken at any given time. As…

Machine Learning · Computer Science 2023-09-19 Charithea Stylianides , Kleanthis Malialis , Panayiotis Kolios

Background: Distributed Research Networks (DRNs) offer significant opportunities for collaborative multi-site research and have significantly advanced healthcare research based on clinical observational data. However, generating…

The Coronavirus disease 2019 (COVID-19) outbreak quickly spread around the world, resulting in over 240 million infections and 4 million deaths by Oct 2021. While the virus is spreading from person to person silently, fear has also been…

Software Engineering · Computer Science 2022-04-20 Han Wang , Chao Wu , Chunyang Chen , Burak Turhan , Shiping Chen , Jon Whittle

This document analyzes the role of data-driven methodologies in Covid-19 pandemic. We provide a SWOT analysis and a roadmap that goes from the access to data sources to the final decision-making step. We aim to review the available…

Populations and Evolution · Quantitative Biology 2020-06-11 Teodoro Alamo , D. G. Reina , Pablo Millán

Teaching data science presents unique challenges and opportunities that cannot be fully addressed by simply borrowing pedagogical strategies from its parent disciplines of statistics and computer science. Here, we present ten simple rules…

Other Statistics · Statistics 2026-02-04 Tiffany A. Timbers , Mine Çetinkaya-Rundel

We present CovidQA, the beginnings of a question answering dataset specifically designed for COVID-19, built by hand from knowledge gathered from Kaggle's COVID-19 Open Research Dataset Challenge. To our knowledge, this is the first…

Computation and Language · Computer Science 2020-04-24 Raphael Tang , Rodrigo Nogueira , Edwin Zhang , Nikhil Gupta , Phuong Cam , Kyunghyun Cho , Jimmy Lin

Norden E. Huang, Fangli Qiao and Ka Kit Tung presented a data-driven model for the COVID-19 epidemic in which the relevant functions depend on a set of seven parameters obtained from a statistical analysis of the available data. These…

Physics and Society · Physics 2020-08-17 Charles Horvath

Emergency response management (ERM) is a challenge faced by communities across the globe. First responders must respond to various incidents, such as fires, traffic accidents, and medical emergencies. They must respond quickly to incidents…

Computers and Society · Computer Science 2023-06-21 Ayan Mukhopadhyay

Rapidly evolving technology, data and analytic landscapes are permeating many fields and professions. In public health, the need for data science skills including data literacy is particularly prominent given both the potential of novel…

Computers and Society · Computer Science 2022-08-09 Nicholas Mirin , Heather Mattie , Latifa Jackson , Zainab Samad , Rumi Chunara

Forecasting the effect of COVID-19 is essential to design policies that may prepare us to handle the pandemic. Many methods have already been proposed, particularly, to forecast reported cases and deaths at country-level and state-level.…

Populations and Evolution · Quantitative Biology 2020-07-14 Ajitesh Srivastava , Tianjian Xu , Viktor K. Prasanna

Context: User-Centered Design and Agile methodologies focus on human issues. Nevertheless, agile methodologies focus on contact with contracting customers and generating value for them. Usually, the communication between end users and the…

Software Engineering · Computer Science 2022-11-28 Bruna Ferreira , Silvio Marques , Marcos Kalinowski , Helio Lopes , Simone D. J. Barbosa

The COVID-19 pandemic has highlighted the need to upgrade systems for infectious disease surveillance and forecasting and modeling of the spread of infection, both of which inform evidence-based public health guidance and policies. Here, we…

Small to medium-scale data science experiments often rely on research software developed ad-hoc by individual scientists or small teams. Often there is no time to make the research software fast, reusable, and open access. The consequence…

Software Engineering · Computer Science 2022-11-10 Moritz Schubotz , Ankit Satpute , Andre Greiner-Petter , Akiko Aizawa , Bela Gipp
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