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Related papers: Variational Graph Normalized Auto-Encoders

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We present Mask-GVAE, a variational generative model for blind denoising large discrete graphs, in which "blind denoising" means we don't require any supervision from clean graphs. We focus on recovering graph structures via deleting…

Machine Learning · Computer Science 2021-02-09 Jia Li , Mengzhou Liu , Honglei Zhang , Pengyun Wang , Yong Wen , Lujia Pan , Hong Cheng

New algorithms for embedding graphs have reduced the asymptotic complexity of finding low-dimensional representations. One-Hot Graph Encoder Embedding (GEE) uses a single, linear pass over edges and produces an embedding that converges…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-02-08 Ariel Lubonja , Cencheng Shen , Carey Priebe , Randal Burns

Combining different modalities of data from human tissues has been critical in advancing biomedical research and personalised medical care. In this study, we leverage a graph embedding model (i.e VGAE) to perform link prediction on…

Genomics · Quantitative Biology 2021-07-27 Amine Amor , Pietro Lio' , Vikash Singh , Ramon Viñas Torné , Helena Andres Terre

Distinguishing the automorphic equivalence of nodes in a graph plays an essential role in many scientific domains, e.g., computational biologist and social network analysis. However, existing graph neural networks (GNNs) fail to capture…

Machine Learning · Computer Science 2021-11-10 Fengli Xu , Quanming Yao , Pan Hui , Yong Li

We present a coupled Variational Auto-Encoder (VAE) method that improves the accuracy and robustness of the probabilistic inferences on represented data. The new method models the dependency between input feature vectors (images) and weighs…

Machine Learning · Computer Science 2025-11-25 Shichen Cao , Jingjing Li , Kenric P. Nelson , Mark A. Kon

To enjoy more social network services, users nowadays are usually involved in multiple online sites at the same time. Aligned social networks provide more information to alleviate the problem of data insufficiency. In this paper, we target…

Social and Information Networks · Computer Science 2019-10-15 Yizhu Jiao , Yun Xiong , Jiawei Zhang , Yangyong Zhu

Variational Auto-Encoders (VAEs) have emerged as powerful probabilistic models for generative tasks. However, their convergence properties have not been rigorously proven. The challenge of proving convergence is inherently difficult due to…

Machine Learning · Computer Science 2024-09-10 Li Wang , Wei Huang

In recent years, graph neural networks (GNNs) have been widely adopted in the representation learning of graph-structured data and provided state-of-the-art performance in various applications such as link prediction, node classification,…

Machine Learning · Computer Science 2021-04-14 Dasol Hwang , Jinyoung Park , Sunyoung Kwon , Kyung-Min Kim , Jung-Woo Ha , Hyunwoo J. Kim

The (variational) graph auto-encoder is widely used to learn representations for graph-structured data. However, the formation of real-world graphs is a complicated and heterogeneous process influenced by latent factors. Existing encoders…

Machine Learning · Computer Science 2024-07-17 Di Fan , Chuanhou Gao

We propose a theoretical approach towards the training numerical stability of Variational AutoEncoders (VAE). Our work is motivated by recent studies empowering VAEs to reach state of the art generative results on complex image datasets.…

Machine Learning · Computer Science 2021-06-28 David Dehaene , Rémy Brossard

Low-dimensional embeddings of nodes in large graphs have proved extremely useful in a variety of prediction tasks, from content recommendation to identifying protein functions. However, most existing approaches require that all nodes in the…

Social and Information Networks · Computer Science 2018-09-11 William L. Hamilton , Rex Ying , Jure Leskovec

Graph node embedding aims at learning a vector representation for all nodes given a graph. It is a central problem in many machine learning tasks (e.g., node classification, recommendation, community detection). The key problem in graph…

Machine Learning · Computer Science 2019-10-01 Shupeng Gui , Xiangliang Zhang , Pan Zhong , Shuang Qiu , Mingrui Wu , Jieping Ye , Zhengdao Wang , Ji Liu

Distributed learning and Edge AI necessitate efficient data processing, low-latency communication, decentralized model training, and stringent data privacy to facilitate real-time intelligence on edge devices while reducing dependency on…

Machine Learning · Computer Science 2025-07-08 Lucas Heublein , Simon Kocher , Tobias Feigl , Alexander Rügamer , Christopher Mutschler , Felix Ott

Recently, there has been great success in applying deep neural networks on graph structured data. Most work, however, focuses on either node- or graph-level supervised learning, such as node, link or graph classification or node-level…

Machine Learning · Computer Science 2021-12-15 Robin Winter , Frank Noé , Djork-Arné Clevert

Graph kernels are widely used for measuring the similarity between graphs. Many existing graph kernels, which focus on local patterns within graphs rather than their global properties, suffer from significant structure information loss when…

Machine Learning · Computer Science 2019-12-02 Lingfei Wu , Ian En-Hsu Yen , Zhen Zhang , Kun Xu , Liang Zhao , Xi Peng , Yinglong Xia , Charu Aggarwal

Code embedding is a keystone in the application of machine learning on several Software Engineering (SE) tasks. To effectively support a plethora of SE tasks, the embedding needs to capture program syntax and semantics in a way that is…

Software Engineering · Computer Science 2022-01-24 Wei Ma , Mengjie Zhao , Ezekiel Soremekun , Qiang Hu , Jie Zhang , Mike Papadakis , Maxime Cordy , Xiaofei Xie , Yves Le Traon

Variational Autoencoders (VAEs) provide a theoretically-backed and popular framework for deep generative models. However, learning a VAE from data poses still unanswered theoretical questions and considerable practical challenges. In this…

Machine Learning · Computer Science 2020-06-01 Partha Ghosh , Mehdi S. M. Sajjadi , Antonio Vergari , Michael Black , Bernhard Schölkopf

Predicting edge weights on graphs has various applications, from transportation systems to social networks. This paper describes a Graph Neural Network (GNN) approach for edge weight prediction with guaranteed coverage. We leverage…

Machine Learning · Computer Science 2024-06-13 Rui Luo , Nicolo Colombo

Graph Networks (GNs) enable the fusion of prior knowledge and relational reasoning with flexible function approximations. In this work, a general GN-based model is proposed which takes full advantage of the relational modeling capabilities…

Computational Engineering, Finance, and Science · Computer Science 2021-07-01 Charilaos Mylonas , Imad Abdallah , Eleni Chatzi

Graph embedding is an effective method to represent graph data in a low dimensional space for graph analytics. Most existing embedding algorithms typically focus on preserving the topological structure or minimizing the reconstruction…

Machine Learning · Computer Science 2019-01-09 Shirui Pan , Ruiqi Hu , Guodong Long , Jing Jiang , Lina Yao , Chengqi Zhang