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Current research in biology heavily depends on the availability and efficient use of information. In order to build new knowledge, various sources of biological data must often be combined. Semantic Web technologies, which provide a common…

Quantitative Methods · Quantitative Biology 2009-02-19 Claude Pasquier

Nowadays, we have the emergence and abundance of many different data repositories and archival systems for scientific data discovery, use, and analysis. With the burgeoning data sharing platforms available, this study addresses how natural…

Digital Libraries · Computer Science 2018-03-06 Yi Shen

Digital data explosion drives a demand for robust and reliable data storage medium. Development of better digital storage device to accumulate Zetta bytes (1 ZB = $10^{21}$ bytes ) of data that will be generated in near future is a big…

Information Theory · Computer Science 2015-05-20 Dixita Limbachiya , Manish K. Gupta

The complexity of human biology and its intricate systems holds immense potential for advancing human health, disease treatment, and scientific discovery. However, traditional manual methods for studying biological interactions are often…

Other Quantitative Biology · Quantitative Biology 2025-01-24 Himanshu Buckchash , Gyanendra Kumar Verma , Dilip K. Prasad

The broad sharing of research data is widely viewed as of critical importance for the speed, quality, accessibility, and integrity of science. Despite increasing efforts to encourage data sharing, both the quality of shared data, and the…

Digital Libraries · Computer Science 2022-08-30 William Dempsey , Ian Foster , Scott Fraser , Carl Kesselman

Twenty-five years ago the desktop computer started becoming ubiquitous in the scientific lab. Researchers were delighted with its ability to both control instrumentation and acquire data on a single system, but they were not completely…

Digital Libraries · Computer Science 2014-03-12 Robert R. White , Kristin Munch

As the amount of scientific data continues to grow at ever faster rates, the research community is increasingly in need of flexible computational infrastructure that can support the entirety of the data science lifecycle, including…

Computers and Society · Computer Science 2016-04-12 Robert L. Grossman , Allison Heath , Mark Murphy , Maria Patterson , Walt Wells

Data science has employed great research efforts in developing advanced analytics, improving data models and cultivating new algorithms. However, not many authors have come across the organizational and socio-technical challenges that arise…

Machine Learning · Computer Science 2022-01-17 Iñigo Martinez , Elisabeth Viles , Igor G. Olaizola

Recently, we have been witnessing huge advancements in the scale of data we routinely generate and collect in pretty much everything we do, as well as our ability to exploit modern technologies to process, analyze and understand this data.…

Databases · Computer Science 2017-09-25 Radwa Elshawi , Sherif Sakr

the storage infrastructure is the foundation on which information relies and therefore must support a company's business objectives and business model. In this environment, simply deploying more and faster storage devices is not enough; a…

Networking and Internet Architecture · Computer Science 2011-10-05 Safarini Osama

Modern data science research can involve massive computational experimentation; an ambitious PhD in computational fields may do experiments consuming several million CPU hours. Traditional computing practices, in which researchers use…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-01-28 Hatef Monajemi , Riccardo Murri , Eric Jonas , Percy Liang , Victoria Stodden , David L. Donoho

In recent years, data science has become an indispensable part of our society. Over time, we have become reliant on this technology because of its opportunity to gain value and new insights from data in any field - business, socializing,…

Computers and Society · Computer Science 2020-10-28 Dinh-An Ho , Oya Beyan

This paper presents a multifarious examination of natural resources and environmental scientists' adventures navigating the policy change towards open access and cultural shift in data management, sharing, and reuse. Situated in the…

Digital Libraries · Computer Science 2018-03-06 Yi Shen

The intensive flow of personal data associated with the trend of computerizing aspects of people's diversity in their daily lives is associated with issues concerning not only people protection and their trust in new technologies, but also…

Computers and Society · Computer Science 2023-06-19 Matteo Busso , Ronal Chenu Abente Acosta , Amalia de Götzen

Biology is at the precipice of a new era where AI accelerates and amplifies the ability to study how cells operate, organize, and work as systems, revealing why disease happens and how to correct it. Organizations globally are prioritizing…

In the last few decades or so, we witness a paradigm shift in our nature studies - from a data-processing based computational approach to an information-processing based cognitive approach. The process is restricted and often misguided by…

Computational Engineering, Finance, and Science · Computer Science 2015-05-20 Emanuel Diamant

Biological data in digital form has become a, if not the, driving force behind innovations in biology, medicine, and the environment. No study and no model would be complete without access to digital data (including text) collected by…

Other Quantitative Biology · Quantitative Biology 2023-11-13 Terence R. Johnson , Philip E. Bourne

Biomedical research centers can empower basic discovery and novel therapeutic strategies by leveraging their large-scale datasets from experiments and patients. This data, together with new technologies to create and analyze it, has ushered…

Stanford Medicine is building a new data platform for our academic research community to do better clinical data science. Hospitals have a large amount of patient data and researchers have demonstrated the ability to reuse that data and AI…

Public data archives are the backbone of modern biological and biomedical research. While archives for biological molecules and structures are well-established, resources for imaging data do not yet cover the full range of spatial and…

Quantitative Methods · Quantitative Biology 2018-11-05 Jan Ellenberg , Jason R Swedlow , Mary Barlow , Charles E Cook , Ardan Patwardhan , Alvis Brazma , Ewan Birney