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Hierarchical clustering is an effective, interpretable method for analyzing structure in data. It reveals insights at multiple scales without requiring a predefined number of clusters and captures nested patterns and subtle relationships,…

Motivation: Clustering is a frequently used concept in variety of bioinformatical applications. We present a new method for hierarchical clustering of data called mutual information clustering (MIC) algorithm. It uses mutual information…

Quantitative Methods · Quantitative Biology 2007-05-23 Alexander Kraskov , Harald Stögbauer , Ralph G. Andrzejak , Peter Grassberger

Networks representing social, biological, technological or other systems are often characterized by higher-order interaction involving any number of nodes. Temporal hypergraphs are given by ordered sequences of hyperedges representing sets…

Physics and Society · Physics 2026-02-27 Jürgen Lerner , Marian-Gabriel Hâncean , Matjaz Perc

Large Language Models (LLMs) are increasingly deployed across diverse domains, raising the need for rigorous reliability assessment methods. Existing benchmark-based evaluations primarily offer descriptive statistics of model accuracy over…

Software Engineering · Computer Science 2026-01-30 Robab Aghazadeh-Chakherlou , Qing Guo , Siddartha Khastgir , Peter Popov , Xiaoge Zhang , Xingyu Zhao

Latent variable models for network data extract a summary of the relational structure underlying an observed network. The simplest possible models subdivide nodes of the network into clusters; the probability of a link between any two nodes…

Machine Learning · Computer Science 2012-07-03 Konstantina Palla , David Knowles , Zoubin Ghahramani

Linear mixed models (LMMs) are a popular class of methods for analyzing longitudinal and clustered data. However, such models can be sensitive to outliers, and this can lead to biased inference on model parameters and inaccurate prediction…

Methodology · Statistics 2025-03-28 Shonosuke Sugasawa , Francis K. C. Hui , Alan H. Welsh

One of the fundamental problems in machine learning is the estimation of a probability distribution from data. Many techniques have been proposed to study the structure of data, most often building around the assumption that observations…

Machine Learning · Statistics 2013-02-22 Oren Rippel , Ryan Prescott Adams

Finding a set of nested partitions of a dataset is useful to uncover relevant structure at different scales, and is often dealt with a data-dependent methodology. In this paper, we introduce a general two-step methodology for model-based…

Computation · Statistics 2021-04-22 Etienne Côme , Nicolas Jouvin , Pierre Latouche , Charles Bouveyron

Statistical modelling in the presence of data organized in groups is a crucial task in Bayesian statistics. The present paper conceives a mixture model based on a novel family of Bayesian priors designed for multilevel data and obtained by…

Methodology · Statistics 2024-07-01 Alessandro Colombi , Raffaele Argiento , Federico Camerlenghi , Lucia Paci

Datasets in the real world are often complex and to some degree hierarchical, with groups and sub-groups of data sharing common characteristics at different levels of abstraction. Understanding and uncovering the hidden structure of these…

Machine Learning · Computer Science 2023-07-10 Aurélien Decelle , Lorenzo Rosset , Beatriz Seoane

Bayesian hierarchical modeling is a natural framework to effectively integrate data and borrow information across groups. In this paper, we address problems related to density estimation and identifying clusters across related groups, by…

Methodology · Statistics 2025-10-29 Huizi Zhang , Sara Wade , Natalia Bochkina

This paper presents a natural extension of stagewise ranking to the the case of infinitely many items. We introduce the infinite generalized Mallows model (IGM), describe its properties and give procedures to estimate it from data. For…

Machine Learning · Computer Science 2012-06-18 Marina Meila , Le Bao

Hierarchical clustering is a class of algorithms that seeks to build a hierarchy of clusters. It has been the dominant approach to constructing embedded classification schemes since it outputs dendrograms, which capture the hierarchical…

Machine Learning · Statistics 2018-08-28 Xiaofei Ma , Satya Dhavala

Retrieval-Augmented Generation (RAG) has revolutionized natural language processing by dynamically integrating external knowledge into Large Language Models (LLMs), addressing their limitation of static training datasets. Recent…

Computation and Language · Computer Science 2024-09-05 Krish Goel , Mahek Chandak

The validation of any database mining methodology goes through an evaluation process where benchmarks availability is essential. In this paper, we aim to randomly generate relational database benchmarks that allow to check probabilistic…

Machine Learning · Computer Science 2016-03-03 Mouna Ben Ishak , Rajani Chulyadyo , Philippe Leray

Lying at the core of human intelligence, relational thinking is characterized by initially relying on innumerable unconscious percepts pertaining to relations between new sensory signals and prior knowledge, consequently becoming a…

Machine Learning · Computer Science 2020-07-09 Hengguan Huang , Fuzhao Xue , Hao Wang , Ye Wang

Recent technological advances have made it easier to collect large and complex networks of time-stamped relational events connecting two or more entities. Relational hyper-event models (RHEMs) aim to explain the dynamics of these events by…

Methodology · Statistics 2025-12-02 Martina Boschi , Jürgen Lerner , Ernst C. Wit

This paper introduces the first multi-lingual and multi-label classification model for implicit discourse relation recognition (IDRR). Our model, HArch, is evaluated on the recently released DiscoGeM 2.0 corpus and leverages hierarchical…

Computation and Language · Computer Science 2025-08-29 Nelson Filipe Costa , Leila Kosseim

Well-calibrated probabilistic regression models are a crucial learning component in robotics applications as datasets grow rapidly and tasks become more complex. Unfortunately, classical regression models are usually either probabilistic…

Machine Learning · Computer Science 2023-09-12 Hany Abdulsamad , Peter Nickl , Pascal Klink , Jan Peters

We present the Infinite Latent Events Model, a nonparametric hierarchical Bayesian distribution over infinite dimensional Dynamic Bayesian Networks with binary state representations and noisy-OR-like transitions. The distribution can be…

Machine Learning · Statistics 2012-05-14 David Wingate , Noah Goodman , Daniel Roy , Joshua Tenenbaum