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Deep convolutional neural networks have driven substantial advancements in the automatic understanding of images. Requiring a large collection of images and their associated annotations is one of the main bottlenecks limiting the adoption…

Computer Vision and Pattern Recognition · Computer Science 2019-08-22 Zahra Mirikharaji , Yiqi Yan , Ghassan Hamarneh

Segmentation of organs of interest in 3D medical images is necessary for accurate diagnosis and longitudinal studies. Though recent advances using deep learning have shown success for many segmentation tasks, large datasets are required for…

Computer Vision and Pattern Recognition · Computer Science 2020-11-20 Soopil Kim , Sion An , Philip Chikontwe , Sang Hyun Park

Accurate segmentation of the region of interest in medical images can provide an essential pathway for devising effective treatment plans for life-threatening diseases. It is still challenging for U-Net, and its state-of-the-art variants,…

Image and Video Processing · Electrical Eng. & Systems 2024-04-09 Md. Rayhan Ahmed , Adnan Ferdous Ashrafi , Raihan Uddin Ahmed , Swakkhar Shatabda , A. K. M. Muzahidul Islam , Salekul Islam

Medical imaging is essential in healthcare to provide key insights into patient anatomy and pathology, aiding in diagnosis and treatment. Non-invasive techniques such as X-ray, Magnetic Resonance Imaging (MRI), Computed Tomography (CT), and…

Image and Video Processing · Electrical Eng. & Systems 2024-12-04 Fnu Neha , Deepshikha Bhati , Deepak Kumar Shukla , Sonavi Makarand Dalvi , Nikolaos Mantzou , Safa Shubbar

The increase of available large clinical and experimental datasets has contributed to a substantial amount of important contributions in the area of biomedical image analysis. Image segmentation, which is crucial for any quantitative…

Computer Vision and Pattern Recognition · Computer Science 2022-03-29 Nikhil Kumar Tomar , Debesh Jha , Michael A. Riegler , Håvard D. Johansen , Dag Johansen , Jens Rittscher , Pål Halvorsen , Sharib Ali

In recent years, deep learning-based networks have achieved state-of-the-art performance in medical image segmentation. Among the existing networks, U-Net has been successfully applied on medical image segmentation. In this paper, we…

Image and Video Processing · Electrical Eng. & Systems 2019-09-04 Reza Azad , Maryam Asadi-Aghbolaghi , Mahmood Fathy , Sergio Escalera

We propose a novel technique to incorporate attention within convolutional neural networks using feature maps generated by a separate convolutional autoencoder. Our attention architecture is well suited for incorporation with deep…

Computer Vision and Pattern Recognition · Computer Science 2019-02-11 Chaitanya Kaul , Suresh Manandhar , Nick Pears

Automatic medical image segmentation is a crucial topic in the medical domain and successively a critical counterpart in the computer-aided diagnosis paradigm. U-Net is the most widespread image segmentation architecture due to its…

Accurate medical image segmentation is essential for diagnosis and treatment planning of diseases. Convolutional Neural Networks (CNNs) have achieved state-of-the-art performance for automatic medical image segmentation. However, they are…

Image and Video Processing · Electrical Eng. & Systems 2020-11-05 Ran Gu , Guotai Wang , Tao Song , Rui Huang , Michael Aertsen , Jan Deprest , Sébastien Ourselin , Tom Vercauteren , Shaoting Zhang

The Pancreatic beta cell is an important target in diabetes research. For scalable modeling of beta cell ultrastructure, we investigate automatic segmentation of whole cell imaging data acquired through soft X-ray tomography. During the…

Quantitative Methods · Quantitative Biology 2020-04-22 John Paul Francis , Hongzhi Wang , Kate White , Tanveer Syeda-Mahmood , Raymond Stevens

The need for labour intensive pixel-wise annotation is a major limitation of many fully supervised learning methods for segmenting bioimages that can contain numerous object instances with thin separations. In this paper, we introduce a…

Computer Vision and Pattern Recognition · Computer Science 2020-09-11 Rihuan Ke , Aurélie Bugeau , Nicolas Papadakis , Peter Schuetz , Carola-Bibiane Schönlieb

Accurate segmentation for medical images is important for clinical diagnosis. Existing automatic segmentation methods are mainly based on fully supervised learning and have an extremely high demand for precise annotations, which are very…

Computer Vision and Pattern Recognition · Computer Science 2021-06-10 Yuanpeng Liu , Qinglei Hui , Zhiyi Peng , Shaolin Gong , Dexing Kong

Image segmentation is a fundamental task in image analysis and clinical practice. The current state-of-the-art techniques are based on U-shape type encoder-decoder networks with skip connections, called U-Net. Despite the powerful…

Computer Vision and Pattern Recognition · Computer Science 2023-02-02 Chun-Wun Cheng , Christina Runkel , Lihao Liu , Raymond H Chan , Carola-Bibiane Schönlieb , Angelica I Aviles-Rivero

Accurate segmentation of multiple organs of the head, neck, chest, and abdomen from medical images is an essential step in computer-aided diagnosis, surgical navigation, and radiation therapy. In the past few years, with a data-driven…

Image and Video Processing · Electrical Eng. & Systems 2023-03-03 Xiaoyu Liu , Linhao Qu , Ziyue Xie , Jiayue Zhao , Yonghong Shi , Zhijian Song

Image segmentation is a primary task in many medical applications. Recently, many deep networks derived from U-Net have been extensively used in various medical image segmentation tasks. However, in most of the cases, networks similar to…

Computer Vision and Pattern Recognition · Computer Science 2019-08-15 Balamurali Murugesan , Kaushik Sarveswaran , Sharath M Shankaranarayana , Keerthi Ram , Mohanasankar Sivaprakasam

Deep convolutional neural networks (CNNs) are state-of-the-art for semantic image segmentation, but typically require many labeled training samples. Obtaining 3D segmentations of medical images for supervised training is difficult and labor…

Computer Vision and Pattern Recognition · Computer Science 2019-07-29 Zhenlin Xu , Marc Niethammer

Brain MR image segmentation is a key task in neuroimaging studies. It is commonly conducted using standard computational tools, such as FSL, SPM, multi-atlas segmentation etc, which are often registration-based and suffer from expensive…

Image and Video Processing · Electrical Eng. & Systems 2019-08-29 Chengliang Dai , Yuanhan Mo , Elsa Angelini , Yike Guo , Wenjia Bai

Ultrasound imaging is widely used in clinical practice due to its cost-effectiveness, mobility, and safety. However, current AI research often treats disease prediction and tissue segmentation as two separate tasks and their model requires…

Image and Video Processing · Electrical Eng. & Systems 2026-03-10 Zhi Chen , Le Zhang

Despite the success of convolutional neural networks for 3D medical-image segmentation, the architectures currently used are still not robust enough to the protocols of different scanners, and the variety of image properties they produce.…

Image and Video Processing · Electrical Eng. & Systems 2022-10-31 Shrajan Bhandary , Zahra Babaiee , Dejan Kostyszyn , Tobias Fechter , Constantinos Zamboglou , Anca-Ligia Grosu , Radu Grosu

Precise delineation of multiple organs or abnormal regions in the human body from medical images plays an essential role in computer-aided diagnosis, surgical simulation, image-guided interventions, and especially in radiotherapy treatment…

Image and Video Processing · Electrical Eng. & Systems 2024-11-19 Shiman Li , Haoran Wang , Yucong Meng , Chenxi Zhang , Zhijian Song