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This paper deals with identifiability of undirected dynamical networks with single-integrator node dynamics. We assume that the graph structure of such networks is known, and aim to find graph-theoretic conditions under which the state…

Optimization and Control · Mathematics 2018-07-24 Henk J. van Waarde , Pietro Tesi , M. Kanat Camlibel

We propose a method to identify nonlinear acyclic networks in continuous time when the dynamics are located on the edges and all the nodes are excited. We show that it is necessary and sufficient to measure all the sinks to identify any…

Optimization and Control · Mathematics 2026-03-05 Ramachandran Anantharaman , Renato Vizuete , Julien M. Hendrickx , Alexandre Mauroy

The shortest-path, commute time, and diffusion distances on undirected graphs have been widely employed in applications such as dimensionality reduction, link prediction, and trip planning. Increasingly, there is interest in using…

Social and Information Networks · Computer Science 2023-07-27 Zachary M. Boyd , Nicolas Fraiman , Jeremy L. Marzuola , Peter J. Mucha , Braxton Osting , Jonathan Weare

We analyze the identifiability of directed acyclic graphs in the case of partial excitation and measurement. We consider an additive model where the nonlinear functions located in the edges depend only on a past input, and we analyze the…

Optimization and Control · Mathematics 2024-09-06 Renato Vizuete , Julien M. Hendrickx

In recent years, there have been intense research efforts to develop efficient methods for probabilistic inference in probabilistic influence diagrams or belief networks. Many people have concluded that the best methods are those based on…

Artificial Intelligence · Computer Science 2013-04-05 Ross D. Shachter , Stig K. Andersen , Kim-Leng Poh

Transport networks are crucial to the functioning of natural and technological systems. Nature features transport networks that are adaptive over a vast range of parameters, thus providing an impressive level of robustness in supply.…

Adaptation and Self-Organizing Systems · Physics 2017-11-28 Erik Andreas Martens , Konstantin Klemm

In this study, we challenge the traditional approach of frequency analysis on directed graphs, which typically relies on a single measure of signal variation such as total variation. We argue that the inherent directionality in directed…

Signal Processing · Electrical Eng. & Systems 2024-01-17 Semin Kwak , Laura Shimabukuro , Antonio Ortega

Heteroclinic cycles and networks are structures in dynamical systems composed of invariant sets and connecting heteroclinic orbits, and can be robust in systems with invariant subspaces. The usual method for analysing the stability of…

Dynamical Systems · Mathematics 2026-04-02 David C. Groothuizen Dijkema , Vivien Kirk , Claire M. Postlethwaite

The paradigm of linear structural equation modeling readily allows one to incorporate causal feedback loops in the model specification. These appear as directed cycles in the common graphical representation of the models. However, the…

Statistics Theory · Mathematics 2025-07-16 Mathias Drton , Marina Garrote-López , Niko Nikov , Elina Robeva , Y. Samuel Wang

Data-driven analysis of complex networks has been in the focus of research for decades. An important area of research is to study how well real networks can be described with a small selection of metrics, furthermore how well network models…

Social and Information Networks · Computer Science 2022-04-28 Marcell Nagy , Roland Molontay

We study the growth of networks from a set of isolated ground nodes by the addition of one new node per time step and also of a fixed number of directed edges leading from the new node to randomly selected nodes already in the network. A…

Statistical Mechanics · Physics 2011-11-10 Valmir C. Barbosa

Despite the enormous success of graph neural networks (GNNs), most existing GNNs can only be applicable to undirected graphs where relationships among connected nodes are two-way symmetric (i.e., information can be passed back and forth).…

Machine Learning · Computer Science 2021-10-15 Zhuo Tan , Bin Liu , Guosheng Yin

We develop a novel convolutional architecture tailored for learning from data defined over directed acyclic graphs (DAGs). DAGs can be used to model causal relationships among variables, but their nilpotent adjacency matrices pose unique…

Machine Learning · Computer Science 2024-05-07 Samuel Rey , Hamed Ajorlou , Gonzalo Mateos

We address the question how a given connection structure (directed graph) can be realised as a heteroclinic network that is complete in the sense that it contains all unstable manifolds of its equilibria. For a directed graph consisting of…

Dynamical Systems · Mathematics 2026-01-26 Sofia B. S. D. Castro , Alexander Lohse

Topological metrics of graphs provide a natural way to describe the prominent features of various types of networks. Graph metrics describe the structure and interplay of graph edges and have found applications in many scientific fields. In…

Data Structures and Algorithms · Computer Science 2018-06-21 Loukianos Spyrou , Javier Escudero

We derive conditions for the identifiability of nonlinear networks characterized by additive dynamics at the level of the edges when all the nodes are excited. In contrast to linear systems, we show that the measurement of all sinks is…

Optimization and Control · Mathematics 2025-05-30 Renato Vizuete , Julien M. Hendrickx

Directed networks such as gene regulation networks and neural networks are connected by arcs (directed links). The nodes in a directed network are often strongly interwound by a huge number of directed cycles, which lead to complex…

Physics and Society · Physics 2017-08-02 Jin-Hua Zhao , Hai-Jun Zhou

We introduce a framework for network analysis based on random walks on directed acyclic graphs where the probability of passing through a given node is the key ingredient. We illustrate its use in evaluating the mutual influence of nodes…

Physics and Society · Physics 2011-10-10 Stanislao Gualdi , Matus Medo , Yi-Cheng Zhang

We recall several known results about minimally 2-connected graphs, and show that they all follow from a decomposition theorem. Starting from an analogy with critically 2-connected graphs, we give structural characterizations of the classes…

Discrete Mathematics · Computer Science 2016-03-27 Pierre Aboulker , Marko Radovanović , Nicolas Trotignon , Kristina Vušković

Directed acyclic graphs (DAGs) are a class of graphs commonly used in practice, with examples that include electronic circuits, Bayesian networks, and neural architectures. While many effective encoders exist for DAGs, it remains…

Machine Learning · Computer Science 2025-05-30 Michael Sun , Orion Foo , Gang Liu , Wojciech Matusik , Jie Chen