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Discovering the governing equations of a dynamical system from observed trajectories provides deeper insight into its structure than mere prediction of future states. We present a data-driven approach to model discovery based on…

Computer Vision and Pattern Recognition · Computer Science 2026-05-27 Martin Brückmann , Babette Dellen , Uwe Jaekel

We propose a fast probabilistic framework for identifying differential equations governing the dynamics of observed data. We recast the SINDy method within a Bayesian framework and use Gaussian approximations for the prior and likelihood to…

Methodology · Statistics 2024-09-24 Lloyd Fung , Urban Fasel , Matthew P. Juniper

A Hamilton-Jacobi formulation has been established previously for phenotypically structured population models where the solution concentrates as Dirac masses in the limit of small diffusion. Is it possible to extend this approach to spatial…

Analysis of PDEs · Mathematics 2014-02-24 Sepideh Mirrahimi

Continuum models for the spatial dynamics of growing cell populations have been widely used to investigate the mechanisms underpinning tissue development and tumour invasion. These models consist of nonlinear partial differential equations…

Tissues and Organs · Quantitative Biology 2019-07-15 Mark AJ Chaplain , Tommaso Lorenzi , Fiona R Macfarlane

Morphological development into evolutionary patterns under structural instability is ubiquitous in living systems and often of vital importance for engineering structures. Here we propose a data-driven approach to understand and predict…

Pattern Formation and Solitons · Physics 2024-07-23 Yingjie Zhao , Zhiping Xu

We present AC-SINDy, a compositional extension of the Sparse Identification of Nonlinear Dynamics (SINDy) framework that replaces explicit feature libraries with a structured representation based on arithmetic circuits. Rather than…

Machine Learning · Computer Science 2026-04-22 Peter Racioppo

Scaling has been proposed as a powerful tool to analyze the properties of complex systems, and in particular for cities where it describes how various properties change with population. The empirical study of scaling on a wide range of…

Physics and Society · Physics 2018-04-18 Jules Depersin , Marc Barthelemy

Data-driven methods of model identification are able to discern governing dynamics of a system from data. Such methods are well suited to help us learn about systems with unpredictable evolution or systems with ambiguous governing dynamics…

Data Analysis, Statistics and Probability · Physics 2025-01-23 Gina Vasey , Daniel Messenger , David Bortz , Andrew Christlieb , Brian O'Shea

This study demonstrates how to construct the solutions of a more general form of population dynamics models via a blend of variational iterative method with Sumudu transform. In this paper, population growth models are formulated in the…

Populations and Evolution · Quantitative Biology 2025-08-14 M. O. Aibinu , S. C. Moyo , S. Moyo

Sparse system identification is the data-driven process of obtaining parsimonious differential equations that describe the evolution of a dynamical system, balancing model complexity and accuracy. There has been rapid innovation in system…

Machine Learning · Computer Science 2023-02-22 Alan A. Kaptanoglu , Lanyue Zhang , Zachary G. Nicolaou , Urban Fasel , Steven L. Brunton

The sparse identification of nonlinear dynamics (SINDy) has been established as an effective technique to produce interpretable models of dynamical systems from time-resolved state data via sparse regression. However, to model parameterized…

Dynamical Systems · Mathematics 2024-05-15 Javier A. Lemus , Benjamin Herrmann

Identifying governing equations in physical and biological systems from datasets remains a long-standing challenge across various scientific disciplines, providing mechanistic insights into complex system evolution. Common methods like…

Dynamical Systems · Mathematics 2025-02-28 Mehrdad Anvari , Hamidreza Marasi , Hossein Kheiri

The Sparse Identification of Nonlinear Dynamics (SINDy) framework has been frequently used to discover parsimonious differential equations governing natural and physical systems. This includes recent extensions to SINDy that enable the…

Numerical Analysis · Mathematics 2026-01-21 Mohammed Alanazi , Majid Bani-Yaghoub

We propose a data-driven framework to simplify the description of spatiotemporal climate variability into few entities and their causal linkages. Given a high-dimensional climate field, the methodology first reduces its dimensionality into…

Atmospheric and Oceanic Physics · Physics 2024-04-08 Fabrizio Falasca , Pavel Perezhogin , Laure Zanna

The formation of out-of-equilibrium patterns is a characteristic feature of spatially-extended, biodiverse, ecological systems. Intriguing examples are provided by cyclic competition of species, as metaphorically described by the…

Populations and Evolution · Quantitative Biology 2008-08-31 Tobias Reichenbach , Mauro Mobilia , Erwin Frey

Mathematical models of biological populations commonly use discrete structure classes to capture trait variation among individuals (e.g. age, size, phenotype, intracellular state). Upscaling these discrete models into continuum descriptions…

Populations and Evolution · Quantitative Biology 2026-03-18 Eleonora Agostinelli , Keith L. Chambers , Helen M. Byrne , Mohit P. Dalwadi

In order to model real ecological systems one has to consider many species that interact in complex ways. However, most of the recent theoretical studies have been restricted to few species systems with rather trivial interactions. The few…

Populations and Evolution · Quantitative Biology 2014-04-11 Shahir Mowlaei , Ahmed Roman , Michel Pleimling

Understanding how species persist under interacting stressors is a central challenge in ecology. We develop a spatially explicit reaction-diffusion framework to investigate competing species in landscapes shaped by climate variability,…

Populations and Evolution · Quantitative Biology 2026-02-02 Ton Viet Ta

The last decades have not only been characterized by an explosive growth of data, but also an increasing appreciation of data as a valuable resource. Their value comes with the ability to extract meaningful patterns that are of economic,…

Machine Learning · Statistics 2020-02-27 Jonas I. Liechti , Sebastian Bonhoeffer

Analysis of the urban population fraction data for sixteen populous countries over the last fifty years reveals a universal increase in urbanization, exhibiting four qualitatively distinct temporal patterns: (i) continuously accelerating…

Physics and Society · Physics 2026-01-06 Neeraj Pandey , Abhineet Agarwal , Raju Roychowdhury , Karmeshu , Parth Pratim Pandey