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Parametric embedding methods such as parametric t-SNE (pt-SNE) have been widely adopted for data visualization and out-of-sample data embedding without further computationally expensive optimization or approximation. However, the…

Machine Learning · Computer Science 2018-04-24 Martin Renqiang Min , Hongyu Guo , Dinghan Shen

We use the k-core decomposition to visualize large scale complex networks in two dimensions. This decomposition, based on a recursive pruning of the least connected vertices, allows to disentangle the hierarchical structure of networks by…

Networking and Internet Architecture · Computer Science 2016-08-16 José Ignacio Alvarez-Hamelin , Luca Dall'Asta , Alain Barrat , Alessandro Vespignani

The growing prevalence of high-dimensional data has fostered the development of multidimensional projection (MP) techniques, such as t-SNE, UMAP, and LAMP, for data visualization and exploration. However, conventional MP methods typically…

Graphics · Computer Science 2024-07-24 Maniru Ibrahim

This chapter introduces OpenStreetMap - a crowd-sourced, worldwide mapping project and geospatial data repository - to illustrate its usefulness in quickly and easily analyzing and visualizing planning and design outcomes in the built…

Physics and Society · Physics 2020-08-28 Geoff Boeing

We are living in the big data age: An ever increasing amount of data is being produced through data acquisition and computer simulations. While large scale analysis and simulations have received significant attention for cloud and…

Graphics · Computer Science 2019-02-26 Stefan Eilemann

Stochastic Neighbor Embedding (SNE) methods minimize the divergence between the similarity matrix of a high-dimensional data set and its counterpart from a low-dimensional embedding, leading to widely applied tools for data visualization.…

Machine Learning · Computer Science 2018-09-13 Yao Lu , Jukka Corander , Zhirong Yang

There has been an intense recent activity in embedding of very high dimensional and nonlinear data structures, much of it in the data science and machine learning literature. We survey this activity in four parts. In the first part we cover…

Machine Learning · Statistics 2022-09-01 Dag Tjøstheim , Martin Jullum , Anders Løland

We propose a new method for realistic real-time novel-view synthesis (NVS) of large scenes. Existing neural rendering methods generate realistic results, but primarily work for small scale scenes (<50 square meters) and have difficulty at…

Computer Vision and Pattern Recognition · Computer Science 2023-11-10 Jeffrey Yunfan Liu , Yun Chen , Ze Yang , Jingkang Wang , Sivabalan Manivasagam , Raquel Urtasun

Feature representation is an important aspect of remote-sensing based image classification. While deep convolutional neural networks are able to effectively amalgamate information, large numbers of parameters often make learned features…

Machine Learning · Computer Science 2022-03-07 Joshua Peeples , Sarah Walker , Connor McCurley , Alina Zare , James Keller , Weihuang Xu

Neighbor embedding methods $t$-SNE and UMAP are the de facto standard for visualizing high-dimensional datasets. Motivated from entirely different viewpoints, their loss functions appear to be unrelated. In practice, they yield strongly…

Machine Learning · Computer Science 2024-06-06 Sebastian Damrich , Jan Niklas Böhm , Fred A. Hamprecht , Dmitry Kobak

tSNE and UMAP are popular dimensionality reduction algorithms due to their speed and interpretable low-dimensional embeddings. Despite their popularity, however, little work has been done to study their full span of differences. We…

Graph neural networks (GNNs) have emerged as powerful tools for learning protein structures by capturing spatial relationships at the residue level. However, existing GNN-based methods often face challenges in learning multiscale…

Machine Learning · Computer Science 2026-02-03 Shih-Hsin Wang , Yuhao Huang , Taos Transue , Justin Baker , Jonathan Forstater , Thomas Strohmer , Bao Wang

Two-dimensional embeddings obtained from dimensionality reduction techniques such as MDS, t-SNE, or UMAP, are widely used to visualize high-dimensional data and support researchers in visually identifying clusters, outliers, and other…

Machine Learning · Computer Science 2026-05-01 Pavlin G. Poličar , Blaž Zupan

Graph Neural Networks (GNNs) have gained popularity in various learning tasks, with successful applications in fields like molecular biology, transportation systems, and electrical grids. These fields naturally use graph data, benefiting…

Machine Learning · Computer Science 2024-09-23 Caio F. Deberaldini Netto , Zhiyang Wang , Luana Ruiz

Generative methods have recently seen significant improvements by generating in a lower-dimensional latent representation of the data. However, many of the generative methods applied in the latent space remain complex and difficult to…

Machine Learning · Computer Science 2025-01-22 Alona Levy-Jurgenson , Zohar Yakhini

We present an efficient neural 3D scene representation for novel-view synthesis (NVS) in large-scale, dynamic urban areas. Existing works are not well suited for applications like mixed-reality or closed-loop simulation due to their limited…

Computer Vision and Pattern Recognition · Computer Science 2024-11-26 Tobias Fischer , Jonas Kulhanek , Samuel Rota Bulò , Lorenzo Porzi , Marc Pollefeys , Peter Kontschieder

We introduce a new unsupervised representation learning and visualization using deep convolutional networks and self organizing maps called Deep Neural Maps (DNM). DNM jointly learns an embedding of the input data and a mapping from the…

Machine Learning · Computer Science 2018-10-18 Mehran Pesteie , Purang Abolmaesumi , Robert Rohling

'Big' high-dimensional data are commonly analyzed in low-dimensions, after performing a dimensionality-reduction step that inherently distorts the data structure. For the same purpose, clustering methods are also often used. These methods…

Machine Learning · Statistics 2019-02-20 Tom Lorimer , Karlis Kanders , Ruedi Stoop

In this work, we analyze the utility of two dimensional document maps for exploratory analysis of Polish case law. We start by comparing two methods of generating such visualizations. First is based on linear principal component analysis…

Computation and Language · Computer Science 2016-03-02 Michal Jungiewicz , Michał Łopuszyński

Graph representations have increasingly grown in popularity during the last years. Existing representation learning approaches explicitly encode network structure. Despite their good performance in downstream processes (e.g., node…

Machine Learning · Computer Science 2018-05-08 Saba A. Al-Sayouri , Ekta Gujral , Danai Koutra , Evangelos E. Papalexakis , Sarah S. Lam