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A variety of algorithms have been proposed for reconstructing trees that show the evolutionary relationships between species by comparing differences in genetic data across present-day taxa. If the leaf-to-leaf distances in a tree can be…

Populations and Evolution · Quantitative Biology 2014-11-18 Olivier Gascuel , Mike Steel

The Gromov-Hausdorff (GH) distance is a natural way to measure distance between two metric spaces. We prove that it is $\mathrm{NP}$-hard to approximate the Gromov-Hausdorff distance better than a factor of $3$ for geodesic metrics on a…

Computational Geometry · Computer Science 2017-06-14 Pankaj K. Agarwal , Kyle Fox , Abhinandan Nath , Anastasios Sidiropoulos , Yusu Wang

Many popular algorithms for searching the space of leaf-labelled trees are based on tree rearrangement operations. Under any such operation, the problem is reduced to searching a graph where vertices are trees and (undirected) edges are…

Data Structures and Algorithms · Computer Science 2020-07-27 Lena Collienne , Alex Gavryushkin

We propose a new unsupervised anomaly detection method based on the sliced-Wasserstein distance for training data selection in machine learning approaches. Our filtering technique is interesting for decision-making pipelines deploying…

Machine Learning · Computer Science 2025-04-18 Julien Pallage , Antoine Lesage-Landry

Graph edit distance (GED) is a powerful and flexible graph matching paradigm that can be used to address different tasks in structural pattern recognition, machine learning, and data mining. In this paper, some new binary linear programming…

Data Structures and Algorithms · Computer Science 2015-05-22 Julien Lerouge , Zeina Abu-Aisheh , Romain Raveaux , Pierre Héroux , Sébastien Adam

An optimal binary search tree for an access sequence on elements is a static tree that minimizes the total search cost. Constructing perfectly optimal binary search trees is expensive so the most efficient algorithms construct almost…

Data Structures and Algorithms · Computer Science 2018-06-28 Mordecai Golin , John Iacono , Stefan Langerman , J. Ian Munro , Yakov Nekrich

As a flexible nonparametric learning tool, the random forests algorithm has been widely applied to various real applications with appealing empirical performance, even in the presence of high-dimensional feature space. Unveiling the…

Statistics Theory · Mathematics 2022-09-27 Chien-Ming Chi , Patrick Vossler , Yingying Fan , Jinchi Lv

We introduce a new spatial data structure for high dimensional data called the \emph{approximate principal direction tree} (APD tree) that adapts to the intrinsic dimension of the data. Our algorithm ensures vector-quantization accuracy…

Machine Learning · Computer Science 2012-06-22 Mark McCartin-Lim , Andrew McGregor , Rui Wang

There is a growing body of work on sorting and selection in models other than the unit-cost comparison model. This work is the first treatment of a natural stochastic variant of the problem where the cost of comparing two elements is a…

Data Structures and Algorithms · Computer Science 2007-10-02 Stanislav Angelov , Keshav Kunal , Andrew McGregor

Random forests and, more generally, (decision\nobreakdash-)tree ensembles are widely used methods for classification and regression. Recent algorithmic advances allow to compute decision trees that are optimal for various measures such as…

Machine Learning · Computer Science 2024-09-25 Christian Komusiewicz , Pascal Kunz , Frank Sommer , Manuel Sorge

The class of self-nested trees presents remarkable compression properties because of the systematic repetition of subtrees in their structure. In this paper, we provide a better combinatorial characterization of this specific family of…

Data Structures and Algorithms · Computer Science 2018-10-26 Romain Azaïs , Jean-Baptiste Durand , Christophe Godin

We propose a novel distance to calculate distance between high dimensional vector pairs, utilizing vector quantization generated encodings. Vector quantization based methods are successful in handling large scale high dimensional data.…

Computer Vision and Pattern Recognition · Computer Science 2015-09-21 Shicong Liu , Junru Shao , Hongtao Lu

In many applications, it is necessary to determine the string similarity. Edit distance[WF74] approach is a classic method to determine Field Similarity. A well known dynamic programming algorithm [GUS97] is used to calculate edit distance…

Data Structures and Algorithms · Computer Science 2007-05-23 Qi Xiao Yang , Sung Sam Yuan , Lu Chun , Li Zhao , Sun Peng

In graph theory, a tree is one of the more popular families of graphs with a wide range of applications in computer science as well as many other related fields. While there are several distance measures over the set of all trees, we…

Information Theory · Computer Science 2021-02-04 Lev Yohananov , Eitan yaakobi

An alphabetic binary tree formulation applies to problems in which an outcome needs to be determined via alphabetically ordered search prior to the termination of some window of opportunity. Rather than finding a decision tree minimizing…

Information Theory · Computer Science 2009-03-28 Michael B. Baer

Essential tasks in autonomous driving includes environment perception, detection and tracking, path planning and action control. This paper focus on path planning, which is one of the challenging task as it needs to find optimal path in…

Robotics · Computer Science 2024-02-20 Sugirtha T , Pranav S , Nitin Benjamin Dasiah , Sridevi M

We present Neural A*, a novel data-driven search method for path planning problems. Despite the recent increasing attention to data-driven path planning, machine learning approaches to search-based planning are still challenging due to the…

Machine Learning · Computer Science 2021-07-08 Ryo Yonetani , Tatsunori Taniai , Mohammadamin Barekatain , Mai Nishimura , Asako Kanezaki

The number of the non-shared edges of two phylogenies is a basic measure of the dissimilarity between the phylogenies. The non-shared edges are also the building block for approximating a more sophisticated metric called the nearest…

Data Structures and Algorithms · Computer Science 2007-05-23 Wing-Kai Hon , Ming-Yang Kao , Tak-Wah Lam , Wing-Kin Sung , Siu-Ming Yiu

Graph Edit Distance (GED) is a general and domain-agnostic metric to measure graph similarity, widely used in graph search or retrieving tasks. However, the exact GED computation is known to be NP-complete. For instance, the widely used A*…

Machine Learning · Computer Science 2023-11-07 Junfeng Liu , Min Zhou , Shuai Ma , Lujia Pan

The problem of navigating a bipedal robot to a desired destination in various environments is very important. However, it is very difficult to solve the navigation problem in real time because the computation time is very long due to the…

Robotics · Computer Science 2022-11-11 Joon-Ha Kim
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