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Related papers: Geometry-Aware Merge Tree Comparisons for Time-Var…

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Merge trees are fundamental structures in topological data analysis. Interleaving distance is a widely accepted metric for comparing merge trees, with applications in visualization and scientific computing. While a greedy algorithm exists…

Computational Geometry · Computer Science 2025-09-22 Elena Farahbakhsh Touli , Talha Bin Masood

Topological structures such as the merge tree provide an abstract and succinct representation of scalar fields. They facilitate effective visualization and interactive exploration of feature-rich data. A merge tree captures the topology of…

Computational Geometry · Computer Science 2024-06-06 Raghavendra Sridharamurthy , Talha Bin Masood , Adhitya Kamakshidasan , Vijay Natarajan

Merge trees are a type of graph-based topological summary that tracks the evolution of connected components in the sublevel sets of scalar functions. They enjoy widespread applications in data analysis and scientific visualization. In this…

Computational Geometry · Computer Science 2022-02-03 Ellen Gasparovic , Elizabeth Munch , Steve Oudot , Katharine Turner , Bei Wang , Yusu Wang

Physical phenomena in science and engineering are frequently modeled using scalar fields. In scalar field topology, graph-based topological descriptors such as merge trees, contour trees, and Reeb graphs are commonly used to characterize…

Computational Geometry · Computer Science 2019-10-10 Lin Yan , Yusu Wang , Elizabeth Munch , Ellen Gasparovic , Bei Wang

Comparative analysis of scalar fields is an important problem with various applications including feature-directed visualization and feature tracking in time-varying data. Comparing topological structures that are abstract and succinct…

Graphics · Computer Science 2024-06-06 Raghavendra Sridharamurthy , Vijay Natarajan

Feature tracking in time-varying scalar fields is a fundamental task in scientific computing. Topological descriptors, which summarize important features of data, have proved to be viable tools to facilitate this task. The merge tree is a…

Graphics · Computer Science 2025-10-14 Son Le Thanh , Tino Weinkauf

Geometric graphs appear in many real-world data sets, such as road networks, sensor networks, and molecules. We investigate the notion of distance between embedded graphs and present a metric to measure the distance between two geometric…

Data Structures and Algorithms · Computer Science 2024-07-15 Erin Wolf Chambers , Elizabeth Munch , Sarah Percival , Xinyi Wang

Temporal sequences of terrains arise in various application areas. To analyze them efficiently, one generally needs a suitable abstraction of the data as well as a method to compare and match them over time. In this paper we consider merge…

Computational Geometry · Computer Science 2025-12-19 Thijs Beurskens , Tim Ophelders , Bettina Speckmann , Kevin Verbeek

The interleaving distance is a key tool for comparing merge trees, which provide topological summaries of scalar functions. In this work, we define an average merge tree for a pair of merge trees using the interleaving distance. Since such…

Computational Geometry · Computer Science 2026-03-03 Elena Farahbakhsh Touli , Ingrid Hotz , Talha Bin Masood

Merge trees, contour trees, and Reeb graphs are graph-based topological descriptors that capture topological changes of (sub)level sets of scalar fields. Comparing scalar fields using their topological descriptors has many applications in…

Computational Geometry · Computer Science 2023-06-05 Fangfei Lan , Salman Parsa , Bei Wang

Distances on merge trees facilitate visual comparison of collections of scalar fields. Two desirable properties for these distances to exhibit are 1) the ability to discern between scalar fields which other, less complex topological…

Computational Geometry · Computer Science 2022-10-18 Brian Bollen , Pasindu Tennakoon , Joshua A. Levine

In this paper, we present a flexible and probabilistic framework for tracking topological features in time-varying scalar fields using merge trees and partial optimal transport. Merge trees are topological descriptors that record the…

Computational Geometry · Computer Science 2025-08-26 Mingzhe Li , Xinyuan Yan , Lin Yan , Tom Needham , Bei Wang

Merge trees are a common topological descriptor for data with a hierarchical component, such as terrains and scalar fields. The interleaving distance, in turn, is a common distance for comparing merge trees. However, the interleaving…

Computational Geometry · Computer Science 2025-01-13 Thijs Beurskens , Tim Ophelders , Bettina Speckmann , Kevin Verbeek

In this work we study the interleaving distance between merge trees from a combinatorial point of view. We use a particular type of matching between trees to obtain a novel formulation of the distance. With such formulation, we tackle the…

Combinatorics · Mathematics 2024-11-11 Matteo Pegoraro

Merge trees are a type of topological descriptors that record the connectivity among the sublevel sets of scalar fields. They are among the most widely used topological tools in visualization. In this paper, we are interested in sketching a…

Computational Geometry · Computer Science 2021-06-01 Mingzhe Li , Sourabh Palande , Lin Yan , Bei Wang

Edit distances between merge trees of scalar fields have many applications in scientific visualization, such as ensemble analysis, feature tracking or symmetry detection. In this paper, we propose branch mappings, a novel approach to the…

Computational Geometry · Computer Science 2022-08-12 Florian Wetzels , Heike Leitte , Christoph Garth

Merge trees are a powerful tool from topological data analysis that is frequently used to analyze scalar fields. The similarity between two merge trees can be captured by an interleaving: a pair of maps between the trees that jointly…

In this work, we propose trait-based merge trees a generalization of merge trees to feature level sets, targeting the analysis of tensor field or general multi-variate data. For this, we employ the notion of traits defined in attribute…

Machine Learning · Computer Science 2023-08-21 Jochen Jankowai , Talha Bin Masood , Ingrid Hotz

In topological data analysis and visualization, topological descriptors such as persistence diagrams, merge trees, contour trees, Reeb graphs, and Morse-Smale complexes play an essential role in capturing the shape of scalar field data. We…

Human-Computer Interaction · Computer Science 2024-06-06 Lin Yan , Talha Bin Masood , Raghavendra Sridharamurthy , Farhan Rasheed , Vijay Natarajan , Ingrid Hotz , Bei Wang

This paper presents a generalization of the Wasserstein distance for both persistence diagrams and merge trees [20], [66] that takes advantage of the regions of their topological features in the input domain. Specifically, we redefine the…

Graphics · Computer Science 2025-10-21 Mathieu Pont , Christoph Garth
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