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I will present a way to implement graph algorithms which is different from traditional methods. This work was motivated by the belief that some ideas from software engineering should be applied to graph algorithms. Re-usability of software…

Data Structures and Algorithms · Computer Science 2010-03-24 Marco Nissen

Funnels are a new natural subclass of DAGs. Intuitively, a DAG is a funnel if every source-sink path can be uniquely identified by one of its arcs. Funnels are an analog to trees for directed graphs that is more restrictive than DAGs but…

Data Structures and Algorithms · Computer Science 2018-02-01 Marcelo Garlet Millani , Hendrik Molter , Rolf Niedermeier , Manuel Sorge

Graph pattern matching algorithms to handle million-scale dynamic graphs are widely used in many applications such as social network analytics and suspicious transaction detections from financial networks. On the other hand, the computation…

Databases · Computer Science 2019-07-10 Hiroki Kanezashi , Toyotaro Suzumura , Dario Garcia-Gasulla , Min-hwan Oh , Satoshi Matsuoka

Counting and sampling directed acyclic graphs from a Markov equivalence class are fundamental tasks in graphical causal analysis. In this paper we show that these tasks can be performed in polynomial time, solving a long-standing open…

Machine Learning · Computer Science 2023-08-22 Marcel Wienöbst , Max Bannach , Maciej Liśkiewicz

Graphs may be used to represent many different problem domains -- a concrete example is that of detecting communities in social networks, which are represented as graphs. With big data and more sophisticated applications becoming widespread…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-04-03 Miguel E. Coimbra , Alexandre P. Francisco , Luis Veiga

Causal inference aids researchers in discovering cause-and-effect relationships, leading to scientific insights. Accurate causal estimation requires identifying confounding variables to avoid false discoveries. Pearl's causal model uses…

Machine Learning · Computer Science 2025-04-22 Anna Zeng , Michael Cafarella , Batya Kenig , Markos Markakis , Brit Youngmann , Babak Salimi

Graph-based methods have been proposed as a unified framework for discrete calculus of local and nonlocal image processing methods in the recent years. In order to translate variational models and partial differential equations to a graph,…

Numerical Analysis · Mathematics 2018-12-10 Ronny Bergmann , Daniel Tenbrinck

We introduce a framework for generating, organizing, and reasoning with computational knowledge. It is motivated by the observation that most problems in Computational Sciences and Engineering (CSE) can be formulated as that of completing…

Machine Learning · Statistics 2022-03-31 Houman Owhadi

Social science theories often postulate causal relationships among a set of variables or events. Although directed acyclic graphs (DAGs) are increasingly used to represent these theories, their full potential has not yet been realized in…

Machine Learning · Statistics 2024-01-17 Sourabh Balgi , Adel Daoud , Jose M. Peña , Geoffrey T. Wodtke , Jesse Zhou

The feed-forward relationship naturally observed in time-dependent processes and in a diverse number of real systems -such as some food-webs and electronic and neural wiring- can be described in terms of so-called directed acyclic graphs…

Physics and Society · Physics 2015-05-19 Joaquín Goñi , Bernat Corominas-Murtra , Ricard V. Solé , Carlos Rodríguez-Caso

We study an extension of the classical graph cut problem, wherein we replace the modular (sum of edge weights) cost function by a submodular set function defined over graph edges. Special cases of this problem have appeared in different…

Data Structures and Algorithms · Computer Science 2016-03-29 Stefanie Jegelka , Jeff Bilmes

Many scientific workflows can be represented by a Directed Acyclic Graph (DAG) where each node represents a task, and there will be a directed edge between two tasks if and only if there is a dependency relationship between the two i.e. the…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-12-20 Atharva Tekawade , Suman Banerjee

We study the optimization of navigational graph queries, i.e., queries which combine recursive and pattern-matching fragments. Current approaches to their evaluation are not effective in practice. Towards addressing this, we present a…

Databases · Computer Science 2026-05-21 Thomas Mulder , George Fletcher , Nikolay Yakovets

Directed acyclic graphs (DAGs) and associated probability models are widely used to model neural connectivity and communication channels. In many experiments, data are collected from multiple subjects whose connectivities may differ but are…

Methodology · Statistics 2014-11-17 Chris J. Oates , Lilia Carneiro da Costa , Tom Nichols

We introduce priors and algorithms to perform Bayesian inference in Gaussian models defined by acyclic directed mixed graphs. Such a class of graphs, composed of directed and bi-directed edges, is a representation of conditional…

Methodology · Statistics 2012-07-02 Ricardo Silva , Zoubin Ghahramani

Recent work has shown that not only decision trees (DTs) may not be interpretable but also proposed a polynomial-time algorithm for computing one PI-explanation of a DT. This paper shows that for a wide range of classifiers, globally…

Artificial Intelligence · Computer Science 2021-06-24 Xuanxiang Huang , Yacine Izza , Alexey Ignatiev , Joao Marques-Silva

Graphical Markov models determined by acyclic digraphs (ADGs), also called directed acyclic graphs (DAGs), are widely studied in statistics, computer science (as Bayesian networks), operations research (as influence diagrams), and many…

Artificial Intelligence · Computer Science 2013-01-14 Steven B. Gillispie , Michael D. Perlman

Bayesian causal discovery offers the power to quantify epistemic uncertainties among a broad range of structurally diverse causal theories potentially explaining the data, represented in forms of directed acyclic graphs (DAGs). However,…

Machine Learning · Computer Science 2024-08-30 Nu Hoang , Bao Duong , Thin Nguyen

Data aggregation is a fundamental primitive in distributed computing wherein a network computes a function of every nodes' input. However, while compute time is non-negligible in modern systems, standard models of distributed computing do…

Data Structures and Algorithms · Computer Science 2019-11-14 Bernhard Haeupler , D Ellis Hershkowitz , Anson Kahng , Ariel D. Procaccia

Bayesian networks (BNs) are widely used graphical models usable to draw statistical inference about Directed acyclic graphs (DAGs). We presented here Graph_sampler a fast free C language software for structural inference on BNs.…

Computation · Statistics 2016-02-05 Sagnik Datta , Ghislaine Gayraud , Eric Leclerc , Frederic Y. Bois
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