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Mutual correlation between segments of DNA or protein sequences can be detected by Smith-Waterman local alignments. We present a statistical analysis of alignment of such sequences, based on a recent scaling theory. A new fidelity measure…

Condensed Matter · Physics 2007-05-23 Rolf Olsen , Terence Hwa , Michael Lassig

We study the number of linear extensions of a partial order with a given proportion of comparable pairs of elements, and estimate the maximum and minimum possible numbers. We also consider a random interval partial order on $n$ elements,…

Combinatorics · Mathematics 2018-10-16 Colin McDiarmid , David Penman , Vasileios Iliopoulos

Not a matter of serious contention, Pearson's correlation coefficient is still the most important statistical association measure. Restricted to just two variables, this measure sometimes doesn't live up to users' needs and expectations.…

Mathematical Finance · Quantitative Finance 2024-02-02 Reza Salimi , Kamran Pakizeh

Minimizing divergence measures under a constraint is an important problem. We derive a sufficient condition that binary divergence measures provide lower bounds for symmetric divergence measures under a given triangular discrimination or…

Information Theory · Computer Science 2022-11-11 Tomohiro Nishiyama

Measure the similarity of the nodes in the complex networks have interested many researchers to explore it. In this paper, a new method which is based on the degree centrality and the Relative-entropy is proposed to measure the similarity…

Social and Information Networks · Computer Science 2015-02-04 Qi Zhang , Meizhu Li , Yong Deng , Sankaran Mahadevan

We provide a method that enables the simple calculation of the maximal correlation coefficient of a bivariate distribution, under suitable conditions. In particular, the method readily applies to known results on order statistics and…

Methodology · Statistics 2016-11-18 Nickos Papadatos , Tatiana Xifara

Classical dependence measures such as Pearson correlation, Spearman's $\rho$, and Kendall's $\tau$ can detect only monotonic or linear dependence. To overcome these limitations, Szekely et al.(2007) proposed distance covariance as a…

Computation · Statistics 2019-02-07 Arin Chaudhuri , Wenhao Hu

We study the problem of computing a longest increasing subsequence in a sequence $S$ of $n$ distinct elements in the presence of persistent comparison errors. In this model, every comparison between two elements can return the wrong result…

Data Structures and Algorithms · Computer Science 2018-08-13 Barbara Geissmann

Correlation functions are often employed to quantify the relationships among interdependent variables or sets of data. Recently, a new class of correlation functions, called Forrelation, has been introduced by Aaronson and Ambainis for…

Quantum Physics · Physics 2016-12-07 Hang Li , Xun Gao , Tao Xin , Man-Hong Yung , Guilu Long

In this note we investigate correlation inequalities for `up-sets' of permutations, in the spirit of the Harris--Kleitman inequality. We focus on two well-studied partial orders on $S_n$, giving rise to differing notions of up-sets. Our…

Combinatorics · Mathematics 2020-04-22 J. Robert Johnson , Imre Leader , Eoin Long

A relational dataset is often analyzed by optimally assigning a label to each element through clustering or ordering. While similar characterizations of a dataset would be achieved by both clustering and ordering methods, the former has…

Machine Learning · Computer Science 2023-04-10 Tatsuro Kawamoto , Masaki Ochi , Teruyoshi Kobayashi

A radial probability measure is a probability measure with a density (with respect to the Lebesgue measure) which depends only on the distances to the origin. Consider the Euclidean space enhanced with a radial probability measure. A…

Probability · Mathematics 2017-10-10 Yashar Memarian

We study the worst-case complexity of a non-monotone line search framework that covers a wide variety of known techniques published in the literature. In this framework, the non-monotonicity is controlled by a sequence of nonnegative…

Optimization and Control · Mathematics 2021-05-25 Geovani N. Grapiglia , Ekkehard W. Sachs

Distance correlation is a novel class of multivariate dependence measure, taking positive values between 0 and 1, and applicable to random vectors of arbitrary dimensions, not necessarily equal. It offers several advantages over the…

Computation · Statistics 2024-05-06 Blanca E. Monroy-Castillo , M. A , Jácome , Ricardo Cao

In astronomy and cosmology, significant effort is devoted to characterizing and understanding spatial cross-correlations between points - e.g. galaxy positions, high energy neutrino arrival directions, X-ray and AGN sources, and continuous…

Cosmology and Nongalactic Astrophysics · Physics 2023-01-11 Arka Banerjee , Tom Abel

Upper bounds on the maximum number of codewords in a binary code of a given length and minimum Hamming distance are considered. New bounds are derived by a combination of linear programming and counting arguments. Some of these bounds…

Information Theory · Computer Science 2007-07-13 Beniamin Mounits , Tuvi Etzion , Simon Litsyn

The autocorrelation and the linear complexity of a key stream sequence in a stream cipher are important cryptographic properties. Many sequences with these good properties have interleaved structure, three classes of binary sequences of…

Cryptography and Security · Computer Science 2018-01-29 Shidong Zhang , Tongjiang Yan

We provide an interpretation of entanglement based on classical correlations between measurement outcomes of complementary properties: states that have correlations beyond a certain threshold are entangled. The reverse is not true, however.…

Quantum Physics · Physics 2015-05-26 Lorenzo Maccone , Dagmar Bruss , Chiara Macchiavello

Measuring the relatedness between scientific publications is essential in many areas of bibliometrics and science policy. Controlled vocabularies provide a promising basis for measuring relatedness and are widely used in combination with…

Digital Libraries · Computer Science 2026-02-17 Emil Dolmer Alnor

We consider the exprissibility in monadic second order logic of certain relations of importance in computer science. For integers $n\geq 1$ and $k\leq b$, a $k$-tuple of sequences in $\{0,1,\ldots, b-1\}^n$ are said to be $k$-hashed if…

Logic · Mathematics 2025-09-17 Simone Costa , Marco Dalai , Stefano Della Fiore , Anita Pasotti
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