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This survey reviews hyperbolic graph embedding models, and evaluate them on anomaly detection, highlighting their advantages over Euclidean methods in capturing complex structures. Evaluating models like \textit{HGCAE},…

Retrieval-augmented generation (RAG) for biomedical knowledge faces a hierarchy-aware ontology grounding challenge: resources like HPO, DO, and MeSH use deep ``is-a" taxonomies, yet production stacks rely on Euclidean embeddings and ANN…

Information Retrieval · Computer Science 2026-04-14 Ou Deng , Shoji Nishimura , Atsushi Ogihara , Qun Jin

Functional magnetic resonance imaging (fMRI) reveals complex brain functional networks with hierarchical topologies crucial for cognitive processing. Standard Euclidean Graph Neural Networks (GNNs) often struggle to represent these…

Computer Vision and Pattern Recognition · Computer Science 2026-03-03 Junhao Jia , Yunyou Liu , Cheng Yang , Yifei Sun , Feiwei Qin , Changmiao Wang , Yong Peng

Foundation models pre-trained on massive datasets, including large language models (LLMs), vision-language models (VLMs), and large multimodal models, have demonstrated remarkable success in diverse downstream tasks. However, recent studies…

Machine Learning · Computer Science 2025-07-25 Neil He , Hiren Madhu , Ngoc Bui , Menglin Yang , Rex Ying

Artificial neural networks (ANNs) were inspired by the architecture and functions of the human brain and have revolutionised the field of artificial intelligence (AI). Inspired by studies on the latent geometry of the brain, in this…

Neurons and Cognition · Quantitative Biology 2025-02-04 Alexander Joseph , Nathan Francis , Meijke Balay

Hyperbolic representations are effective in modeling knowledge graph data which is prevalently used to facilitate multi-hop reasoning. However, a rigorous and detailed comparison of the two spaces for this task is lacking. In this paper,…

Computation and Language · Computer Science 2025-07-08 Simon Welz , Lucie Flek , Akbar Karimi

Machine learning models differ in terms of accuracy, computational/memory complexity, training time, and adaptability among other characteristics. For example, neural networks (NNs) are well-known for their high accuracy due to the quality…

Machine Learning · Computer Science 2020-08-05 Mahdi Nazemi , Amirhossein Esmaili , Arash Fayyazi , Massoud Pedram

Representing data in hyperbolic space can effectively capture latent hierarchical relationships. With the goal of enabling accurate classification of points in hyperbolic space while respecting their hyperbolic geometry, we introduce…

Machine Learning · Computer Science 2018-06-04 Hyunghoon Cho , Benjamin DeMeo , Jian Peng , Bonnie Berger

Neural embeddings have been used with great success in Natural Language Processing (NLP). They provide compact representations that encapsulate word similarity and attain state-of-the-art performance in a range of linguistic tasks. The…

Machine Learning · Statistics 2018-09-20 Benjamin Paul Chamberlain , James Clough , Marc Peter Deisenroth

Learning low-dimensional numerical representations from symbolic data, e.g., embedding the nodes of a graph into a geometric space, is an important concept in machine learning. While embedding into Euclidean space is common, recent…

Machine Learning · Computer Science 2024-10-10 Thomas Bläsius , Jean-Pierre von der Heydt , Maximilian Katzmann , Nikolai Maas

Accurate classification of microscopic blood cells is still a critical task in medical image analysis, where subtle variations and limited data can challenge conventional deep learning models. As such, we investigate in this work the…

Computer Vision and Pattern Recognition · Computer Science 2026-05-25 Guilherme Cruz , Nouhaila Innan , Alberto Marchisio , Gabriel Falcao , Muhammad Shafique

Natural language data exhibit tree-like hierarchical structures such as the hypernym-hyponym relations in WordNet. FastText, as the state-of-the-art text classifier based on shallow neural network in Euclidean space, may not model such…

Computation and Language · Computer Science 2021-12-20 Yudong Zhu , Di Zhou , Jinghui Xiao , Xin Jiang , Xiao Chen , Qun Liu

In large-scale recommender systems, the user-item networks are generally scale-free or expand exponentially. The latent features (also known as embeddings) used to describe the user and item are determined by how well the embedding space…

Information Retrieval · Computer Science 2022-05-31 Menglin Yang , Min Zhou , Jiahong Liu , Defu Lian , Irwin King

Clustering is a fundamental unsupervised learning task for uncovering patterns in data. While Gaussian Blurring Mean Shift (GBMS) has proven effective for identifying arbitrarily shaped clusters in Euclidean space, it struggles with…

Machine Learning · Computer Science 2025-12-15 Arghya Pratihar , Arnab Seal , Swagatam Das , Inesh Chattopadhyay

Hyperbolic spaces, which have the capacity to embed tree structures without distortion owing to their exponential volume growth, have recently been applied to machine learning to better capture the hierarchical nature of data. In this…

Machine Learning · Computer Science 2021-03-18 Ryohei Shimizu , Yusuke Mukuta , Tatsuya Harada

Graph Neural Networks (GNNs) have emerged as formidable resources for processing graph-based information across diverse applications. While the expressive power of GNNs has traditionally been examined in the context of graph-level tasks,…

Machine Learning · Computer Science 2025-03-12 A. Martina Neuman , Rongrong Wang , Yuying Xie

With the continued innovations of deep neural networks, spiking neural networks (SNNs) that more closely resemble biological brain synapses have attracted attention owing to their low power consumption.However, for continuous data values,…

Neural and Evolutionary Computing · Computer Science 2021-03-02 Naoya Muramatsu , Hai-Tao Yu

Most real-world datasets consist of a natural hierarchy between classes or an inherent label structure that is either already available or can be constructed cheaply. However, most existing representation learning methods ignore this…

Machine Learning · Computer Science 2024-12-03 Aditya Sinha , Siqi Zeng , Makoto Yamada , Han Zhao

Embedding into hyperbolic space is emerging as an effective representation technique for datasets that exhibit hierarchical structure. This development motivates the need for algorithms that are able to effectively extract knowledge and…

Data Structures and Algorithms · Computer Science 2020-09-03 Xian Wu , Moses Charikar

Temporal knowledge graph (TKG) reasoning predicts future events based on historical data, but it's challenging due to the complex semantic and hierarchical information involved. Existing Euclidean models excel at capturing semantics but…

Machine Learning · Computer Science 2024-09-04 Siling Feng , Zhisheng Qi , Cong Lin