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Biofilm growth changes many physical properties of porous media such as porosity, permeability and mass transport parameters. The growth depends on various environmental conditions, and in particular, on flow rates. Modeling the evolution…

We study surface and bulk properties of porous films produced by a model in which particles incide perpendicularly to a substrate, interact with deposited neighbors in its trajectory, and aggregate laterally with probability of order $a$ at…

Statistical Mechanics · Physics 2015-06-10 Fabio D. A. Aarao Reis

A computer simulation model is proposed to study film growth and surface roughness in aqueous ($A$) solution of hydrophobic ($H$) and hydrophilic ($P$) groups on a simple three dimensional lattice of size $L_x \times L_y \times L_z$ with an…

Soft Condensed Matter · Physics 2007-05-23 Shihai Yang , Adam Seyfarth , Sam Bateman , Ras B. Pandey

We present a comprehensive theoretical and computational model that explores the behavior of a thin hydrated film bonded to a non-hydrated / impermeable soft substrate in the context of surface and bulk elasticity coupled with surface…

Soft Condensed Matter · Physics 2025-05-07 Jaemin Kim , Keon Ho Kim , Nikolaos Bouklas

Excess pore pressure in granular--fluid mixtures can transiently suppress frictional contacts and dramatically enhance flow mobility, yet its evolution is commonly modeled using constant effective diffusivities. Here we show that the…

Soft Condensed Matter · Physics 2026-04-21 Eric C. P. Breard , Claudia Elijas Parra , Mattia de' Michieli Vitturi

We investigate the upscaling of diffusive transport parameters as function of pore scale material structure using a stochastic framework. We focus on sub-REV (representative elementary volume) scale where the complexity of pore space…

Materials Science · Physics 2021-06-21 Alraune Zech , Matthijs de Winter

Transport of viscous fluid through porous media is a direct consequence of the pore structure. Here we investigate transport through a specific class of two-dimensional porous geometries, namely those formed by fluid-mechanical erosion. We…

Fluid Dynamics · Physics 2020-05-20 Shang-Huan Chiu , M. N. J. Moore , Bryan D. Quaife

There is significant interest in modelling the mechanics and physics of growth of soft biological systems such as tumors and bacterial biofilms. Solid tumors account for more than 85% of cancer mortality and bacterial biofilms account for a…

Soft Condensed Matter · Physics 2024-03-29 Chockalingam Senthilnathan , Tal Cohen

The growth of a rough and porous thin surface by deposition of randomly shaped clusters with different sizes over an initially flat linear substrate is simulated, using Monte Carlo technique. Unlike the ordinary Random Deposition, our…

Mesoscale and Nanoscale Physics · Physics 2012-11-09 ZH. Ebrahiminejad , Seyed Farhad Masoudi , R. S. Dariani , Saeed S. Jahromi

We study a thin film growth model with temperature activated diffusion of adsorbed particles, allowing for the formation of overhangs and pores, but without detachment of adatoms or clusters from the deposit. Simulations in one-dimensional…

Statistical Mechanics · Physics 2015-12-02 Dung di Caprio , F. D. A. Aarao Reis

Two-dimensional simulations are used to explore topological transitions that occur during the formation of films grown from grains that are seeded on substrates. This is done for a relatively large range of the initial value $\Phi_s$ of the…

Materials Science · Physics 2022-01-21 Stoffel D. Janssens , David Vázquez-Cortés , Eliot Fried

The random deposition model must be enriched to reflect the variety of surface roughness due to some material characteristics of the film growing by vacuum deposition or sputtering. The essence of the computer simulation in this case is to…

Condensed Matter · Physics 2007-05-23 K. Malarz , A. Z. Maksymowicz

In soft porous media, deformation drives solute transport via the intrinsic coupling between flow of the fluid and rearrangement of the pore structure. Solute transport driven by periodic loading, in particular, can be of great relevance in…

Fluid Dynamics · Physics 2025-04-16 Matilde Fiori , Satyajit Pramanik , Christopher W. MacMinn

Surface growth, by association or dissociation of material on the boundaries of a body, is ubiquitous in both natural and engineering systems. It is the fundamental mechanism by which biological materials grow, starting from the level of a…

Soft Condensed Matter · Physics 2019-03-06 Rami Abi-Akl , Rohan Abeyaratne , Tal Cohen

This note presents a simulation method for investigating the relationship between porosity and particle size distribution in porous media characterization. The method simulates particle packing based on particle size distributions,…

Soft Condensed Matter · Physics 2024-09-25 Yuhe Wang

Production, drainage and stability of foams films, i.e. films in contact with their menisci, are fascinating problems that remain still unsolved. In this article, we propose to explore the regime of large velocities and large film sizes.…

Soft Condensed Matter · Physics 2023-04-25 Marina Pasquet , Frédéric Restagno , Isabelle Cantat , Emmanuelle Rio

The sessile microbial communities known as biofilms exhibit varying architectures as environmental factors are varied, which for immersed biofilms includes the shear rate of the surrounding flow. Here we modify an established agent-based…

Biological Physics · Physics 2014-03-11 D. A. Head

Recent experimental and theoretical investigations of crystal growth from solution in the vicinity of an impermeable wall have shown that: (i) growth can be maintained within the contact region when a liquid film is present between the…

Soft Condensed Matter · Physics 2019-03-27 Luca Gagliardi , Olivier Pierre-Louis

In this paper, we derive upscaled equations for modelling biofilm growth in porous media. The resulting macro-scale mathematical models consider permeable multi-species biofilm including water flow, transport, detachment and reactions. The…

When a fluid carrying a passive solute flows quickly through porous media, three key macroscale transport mechanisms occur. These mechanisms are diffusion, advection and dispersion, all of which depend on the microstructure of the porous…

Fluid Dynamics · Physics 2024-10-16 Lucy C Auton , Mohit P. Dalwadi , Ian M. Griffiths
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