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We propose a reinforcement-learning algorithm to tackle the challenge of reconstructing phylogenetic trees. The search for the tree that best describes the data is algorithmically challenging, thus all current algorithms for phylogeny…

Populations and Evolution · Quantitative Biology 2023-03-14 Dana Azouri , Oz Granit , Michael Alburquerque , Yishay Mansour , Tal Pupko , Itay Mayrose

Classifier evasion consists in finding for a given instance $x$ the nearest instance $x'$ such that the classifier predictions of $x$ and $x'$ are different. We present two novel algorithms for systematically computing evasions for tree…

Machine Learning · Computer Science 2016-05-30 Alex Kantchelian , J. D. Tygar , Anthony D. Joseph

We introduce a novel way to combine boosting with Gaussian process and mixed effects models. This allows for relaxing, first, the zero or linearity assumption for the prior mean function in Gaussian process and grouped random effects models…

Machine Learning · Computer Science 2024-11-06 Fabio Sigrist

Tree-boosting is a widely used machine learning technique for tabular data. However, its out-of-sample accuracy is critically dependent on multiple hyperparameters. In this article, we empirically compare several popular methods for…

Machine Learning · Computer Science 2026-05-29 Floris Jan Koster , Fabio Sigrist

Ecological Momentary Assessment (EMA) data is organized in multiple levels (per-subject, per-day, etc.) and this particular structure should be taken into account in machine learning algorithms used in EMA like decision trees and its…

Machine Learning · Computer Science 2016-07-07 Gerasimos Spanakis , Gerhard Weiss , Anne Roefs

Machine learning tools are commonly used in modern high energy physics (HEP) experiments. Different models, such as boosted decision trees (BDT) and artificial neural networks (ANN), are widely used in analyses and even in the software…

Data Analysis, Statistics and Probability · Physics 2016-12-21 A. Rogozhnikov

Decision trees algorithms use a gain function to select the best split during the tree's induction. This function is crucial to obtain trees with high predictive accuracy. Some gain functions can suffer from a bias when it compares splits…

Machine Learning · Statistics 2018-01-26 Antonin Leroux , Matthieu Boussard , Remi Dès

Gradient boosted decision trees are a popular machine learning technique, in part because of their ability to give good accuracy with small models. We describe two extensions to the standard tree boosting algorithm designed to increase this…

Machine Learning · Statistics 2017-11-01 Natalia Ponomareva , Thomas Colthurst , Gilbert Hendry , Salem Haykal , Soroush Radpour

We address the problem of Bayesian reinforcement learning using efficient model-based online planning. We propose an optimism-free Bayes-adaptive algorithm to induce deeper and sparser exploration with a theoretical bound on its performance…

Machine Learning · Computer Science 2020-06-30 Divya Grover , Debabrota Basu , Christos Dimitrakakis

Prediction suffix trees (PST) provide an effective tool for sequence modelling and prediction. Current prediction techniques for PSTs rely on exact matching between the suffix of the current sequence and the previously observed sequence. We…

Machine Learning · Computer Science 2018-08-08 Dongwoo Kim , Christian Walder

The efficacy of particle identification is compared using artificial neutral networks and boosted decision trees. The comparison is performed in the context of the MiniBooNE, an experiment at Fermilab searching for neutrino oscillations.…

Data Analysis, Statistics and Probability · Physics 2007-05-23 Byron P. Roe , Hai-Jun Yang , Ji Zhu , Yong Liu , Ion Stancu , Gordon McGregor

This paper describes a set of comparative experiments for the problem of automatically filtering unwanted electronic mail messages. Several variants of the AdaBoost algorithm with confidence-rated predictions [Schapire & Singer, 99] have…

Computation and Language · Computer Science 2007-05-23 Xavier Carreras , Lluis Marquez

The problem of adversarial robustness has been studied extensively for neural networks. However, for boosted decision trees and decision stumps there are almost no results, even though they are widely used in practice (e.g. XGBoost) due to…

Machine Learning · Computer Science 2019-11-01 Maksym Andriushchenko , Matthias Hein

We propose a novel tree-based ensemble method, named XGBoostPP, to nonparametrically estimate the intensity of a point process as a function of covariates. It extends the use of gradient-boosted regression trees (Chen & Guestrin, 2016) to…

Methodology · Statistics 2024-02-01 C. Lu , Y. Guan , M. N. M. van Lieshout , G. Xu

Two popular boosted decsion tree (BDT) methods, Adaptive BDT (AdaBDT) and Gradient BDT (GradBDT) are studied in the classification problem of separating signal from background assuming all trees are weak learners. The following results are…

Data Analysis, Statistics and Probability · Physics 2018-11-13 Li-Gang Xia

Gradient boosting from the field of statistical learning is widely known as a powerful framework for estimation and selection of predictor effects in various regression models by adapting concepts from classification theory. Current…

Methodology · Statistics 2020-11-03 Colin Griesbach , Benjamin Säfken , Elisabeth Waldmann

Bagging and boosting, two effective machine learning techniques, are applied to natural language parsing. Experiments using these techniques with a trainable statistical parser are described. The best resulting system provides roughly as…

Computation and Language · Computer Science 2007-05-23 John C. Henderson , Eric Brill

In this paper we propose using the principle of boosting to reduce the bias of a random forest prediction in the regression setting. From the original random forest fit we extract the residuals and then fit another random forest to these…

Machine Learning · Statistics 2021-02-25 Indrayudh Ghosal , Giles Hooker

Design flow parameters are of utmost importance to chip design quality and require a painfully long time to evaluate their effects. In reality, flow parameter tuning is usually performed manually based on designers' experience in an ad hoc…

Most real-world classification problems deal with imbalanced datasets, posing a challenge for Artificial Intelligence (AI), i.e., machine learning algorithms, because the minority class, which is of extreme interest, often proves difficult…

Machine Learning · Computer Science 2025-04-28 Gissel Velarde , Michael Weichert , Anuj Deshmunkh , Sanjay Deshmane , Anindya Sudhir , Khushboo Sharma , Vaibhav Joshi