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Cell detection in histopathology images is of great value in clinical practice. \textit{Convolutional neural networks} (CNNs) have been applied to cell detection to improve the detection accuracy, where cell annotations are required for…

Computer Vision and Pattern Recognition · Computer Science 2021-07-01 Zipei Zhao , Fengqian Pang , Zhiwen Liu , Chuyang Ye

Cell detection is the task of detecting the approximate positions of cell centroids from microscopy images. Recently, convolutional neural network-based approaches have achieved promising performance. However, these methods require a…

Computer Vision and Pattern Recognition · Computer Science 2021-07-20 Kazuya Nishimura , Hyeonwoo Cho , Ryoma Bise

Cell detection in histopathology images is of great interest to clinical practice and research, and convolutional neural networks (CNNs) have achieved remarkable cell detection results. Typically, to train CNN-based cell detection models,…

Computer Vision and Pattern Recognition · Computer Science 2023-02-17 Zipei Zhao , Fengqian Pang , Yaou Liu , Zhiwen Liu , Chuyang Ye

The labor-intensive annotation process of semantic segmentation datasets is often prone to errors, since humans struggle to label every pixel correctly. We study algorithms to automatically detect such annotation errors, in particular…

Machine Learning · Computer Science 2023-07-12 Vedang Lad , Jonas Mueller

We propose a weakly-supervised cell tracking method that can train a convolutional neural network (CNN) by using only the annotation of "cell detection" (i.e., the coordinates of cell positions) without association information, in which…

Computer Vision and Pattern Recognition · Computer Science 2020-07-17 Hiroki Tokunaga , Brian Kenji Iwana , Yuki Teramoto , Akihiko Yoshizawa , Ryoma Bise

Current state-of-the-art methods for object detection rely on annotated bounding boxes of large data sets for training. However, obtaining such annotations is expensive and can require up to hundreds of hours of manual labor. This poses a…

Computer Vision and Pattern Recognition · Computer Science 2025-08-04 Hannah Kniesel , Leon Sick , Tristan Payer , Tim Bergner , Kavitha Shaga Devan , Clarissa Read , Paul Walther , Timo Ropinski

Segmentation is a fundamental process in microscopic cell image analysis. With the advent of recent advances in deep learning, more accurate and high-throughput cell segmentation has become feasible. However, most existing deep…

Computer Vision and Pattern Recognition · Computer Science 2020-06-25 Hyeonsoo Lee , Won-Ki Jeong

In microscopy image cell segmentation, it is common to train a deep neural network on source data, containing different types of microscopy images, and then fine-tune it using a support set comprising a few randomly selected and annotated…

Computer Vision and Pattern Recognition · Computer Science 2022-11-21 Youssef Dawoud , Arij Bouazizi , Katharina Ernst , Gustavo Carneiro , Vasileios Belagiannis

Annotating images for semantic segmentation requires intense manual labor and is a time-consuming and expensive task especially for domains with a scarcity of experts, such as Forensic Anthropology. We leverage the evolving nature of images…

Computer Vision and Pattern Recognition · Computer Science 2021-05-24 Sara Mousavi , Zhenning Yang , Kelley Cross , Dawnie Steadman , Audris Mockus

Patch classification models based on deep learning have been utilized in whole-slide images (WSI) of H&E-stained tissue samples to assist pathologists in grading follicular lymphoma patients. However, these approaches still require…

Deep learning methods have achieved promising performance in many areas, but they are still struggling with noisy-labeled images during the training process. Considering that the annotation quality indispensably relies on great expertise,…

Computer Vision and Pattern Recognition · Computer Science 2019-07-30 Haidong Zhu , Jialin Shi , Ji Wu

The success of supervised deep learning models on cell recognition tasks relies on detailed annotations. Many previous works have managed to reduce the dependency on labels. However, considering the large number of cells contained in a…

Computer Vision and Pattern Recognition · Computer Science 2023-08-23 Pingyi Chen , Chenglu Zhu , Zhongyi Shui , Jiatong Cai , Sunyi Zheng , Shichuan Zhang , Lin Yang

Using deep learning, we now have the ability to create exceptionally good semantic segmentation systems; however, collecting the prerequisite pixel-wise annotations for training images remains expensive and time-consuming. Therefore, it…

Computer Vision and Pattern Recognition · Computer Science 2022-10-19 Aneesh Rangnekar , Christopher Kanan , Matthew Hoffman

Deep ConvNets have shown great performance for single-label image classification (e.g. ImageNet), but it is necessary to move beyond the single-label classification task because pictures of everyday life are inherently multi-label.…

Computer Vision and Pattern Recognition · Computer Science 2019-02-27 Thibaut Durand , Nazanin Mehrasa , Greg Mori

Training neural networks using limited annotations is an important problem in the medical domain. Deep Neural Networks (DNNs) typically require large, annotated datasets to achieve acceptable performance which, in the medical domain, are…

Computer Vision and Pattern Recognition · Computer Science 2024-10-28 Bethany H. Thompson , Gaetano Di Caterina , Jeremy P. Voisey

In this work, we for the first time present a method for detecting label errors in image datasets with semantic segmentation, i.e., pixel-wise class labels. Annotation acquisition for semantic segmentation datasets is time-consuming and…

Computer Vision and Pattern Recognition · Computer Science 2024-08-27 Matthias Rottmann , Marco Reese

Compared with multi-class classification, multi-label classification that contains more than one class is more suitable in real life scenarios. Obtaining fully labeled high-quality datasets for multi-label classification problems, however,…

Computer Vision and Pattern Recognition · Computer Science 2022-10-26 Xin Zhang , Rabab Abdelfattah , Yuqi Song , Xiaofeng Wang

In the field of image classification, existing methods often struggle with biased or ambiguous data, a prevalent issue in real-world scenarios. Current strategies, including semi-supervised learning and class blending, offer partial…

Computer Vision and Pattern Recognition · Computer Science 2024-04-30 Lars Schmarje , Vasco Grossmann , Claudius Zelenka , Johannes Brünger , Reinhard Koch

Training deep neural networks is challenging when large and annotated datasets are unavailable. Extensive manual annotation of data samples is time-consuming, expensive, and error-prone, notably when it needs to be done by experts. To…

Machine Learning · Computer Science 2021-09-08 Barbara C Benato , Alexandru C Telea , Alexandre X Falcão

Large-scale multi-label classification datasets are commonly, and perhaps inevitably, partially annotated. That is, only a small subset of labels are annotated per sample. Different methods for handling the missing labels induce different…

Computer Vision and Pattern Recognition · Computer Science 2021-10-22 Emanuel Ben-Baruch , Tal Ridnik , Itamar Friedman , Avi Ben-Cohen , Nadav Zamir , Asaf Noy , Lihi Zelnik-Manor
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