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The Ly$\alpha$ forest (LAF) at $z>5$ probes the thermal and reionization history of the intergalactic medium (IGM) and the nature of dark matter, but its interpretation requires comparison to cosmological hydrodynamical simulations. At…

Cosmology and Nongalactic Astrophysics · Physics 2023-05-26 Caitlin C. Doughty , Joseph F. Hennawi , Frederick B. Davies , Zarija Lukić , Jose Oñorbe

It is shown that many properties of Ly-alpha forest absorbers can be derived using simple physical arguments. Analytical expressions are derived for the density and the size of an absorber as a function of its neutral hydrogen column…

Astrophysics · Physics 2007-05-23 Joop Schaye

We use a cosmological hydrodynamic simulation of a cold dark matter universe to investigate theoretically the relationship between high redshift galaxies and the Lyman=alpha forest at redshift z=3. Galaxies in the simulation are surrounded…

We investigate the nature of correlations in the small-scale flux statistics of the Lyman-$\alpha$ (Ly$\alpha$) forest across redshift bins. Understanding these correlations is important for unbiased cosmological and astrophysical parameter…

Cosmology and Nongalactic Astrophysics · Physics 2024-03-13 Bhaskar Arya , Aseem Paranjape , Tirthankar Roy Choudhury

We evaluate the performance of the Lyman-$\alpha$ forest weak gravitational lensing estimator of Metcalf et al. on forest data from hydrodynamic simulations and ray-traced simulated lensing potentials. We compare the results to those…

Cosmology and Nongalactic Astrophysics · Physics 2025-01-30 Patrick Shaw , Rupert A. C. Croft , R. Benton Metcalf

The \lya forest at high redshifts is a powerful probe of reionization. Modeling and observing this imprint comes with significant technical challenges: inhomogeneous reionization must be taken into account while simultaneously being able to…

Cosmology and Nongalactic Astrophysics · Physics 2019-05-21 Paulo Montero-Camacho , Christopher M. Hirata , Paul Martini , Klaus Honscheid

We determine the product of the expansion rate and angular-diameter distance at redshift $z=2.3$ from the anisotropy of Lyman-$\alpha$ (Ly$\alpha$) forest correlations measured by the Sloan Digital Sky Survey (SDSS). Our result is the most…

Cosmology and Nongalactic Astrophysics · Physics 2023-06-21 Andrei Cuceu , Andreu Font-Ribera , Seshadri Nadathur , Benjamin Joachimi , Paul Martini

It has been realised only recently that TeV emission from blazars can significantly heat the intergalactic medium (IGM) by pair-producing high-energy electrons and positrons, which in turn excite vigorous plasma instabilities, leading to a…

Cosmology and Nongalactic Astrophysics · Physics 2015-05-28 Ewald Puchwein , Christoph Pfrommer , Volker Springel , Avery E. Broderick , Philip Chang

The signature left in quasar spectra by the presence of neutral hydrogen in the Universe allows one to constrain the sum of the neutrino masses with improved sensitivity, with respect to laboratory experiments, and may shed a new light on…

Cosmology and Nongalactic Astrophysics · Physics 2014-09-05 Graziano Rossi , Nathalie Palanque-Delabrouille , Arnaud Borde , Matteo Viel , Christophe Yeche , James S. Bolton , James Rich , Jean-Marc Le Goff

We present a novel maximum a posteriori estimator to jointly estimate band-powers and the covariance of the three-dimensional power spectrum (P3D) of Lyman-alpha forest flux fluctuations, called MAPLE. Our Wiener-filter based algorithm…

Cosmology and Nongalactic Astrophysics · Physics 2024-03-27 Benjamin Horowitz , Roger de Belsunce , Zarija Lukic

We tackle the challenging problem of creating full and accurate three dimensional reconstructions of botanical trees with the topological and geometric accuracy required for subsequent physical simulation, e.g. in response to wind forces.…

Computer Vision and Pattern Recognition · Computer Science 2018-12-24 Ed Quigley , Winnie Lin , Yilin Zhu , Ronald Fedkiw

Cosmological simulations with gas dynamics suggest that the Lyman-alpha forest is produced mainly by "small scale structure" --- filaments and sheets that are the high redshift analog of today's galaxy superclusters. There is no sharp…

Astrophysics · Physics 2016-01-27 David H. Weinberg , Lars Hernquist , Neal Katz , Jordi Miralda-Escude

The Lyman-$\alpha$ forests observed in the spectra of high-redshift quasars can be used as a tracer of the cosmological matter density to study baryon acoustic oscillations (BAO) and the Alcock-Paczynski effect. Extraction of cosmological…

We present DeepCHART (Deep learning for Cosmological Heterogeneity and Astrophysical Reconstruction via Tomography), a deep learning framework designed to reconstruct the three-dimensional dark matter density field at redshift $z=2.5$ from…

Cosmology and Nongalactic Astrophysics · Physics 2025-07-02 Soumak Maitra , Matteo Viel , Girish Kulkarni

Lyman-$\alpha$ forest data are known to be a good probe of the small scale matter power. In this paper, we explore the redshift evolution of the observable effective optical depth $\tau_{\rm eff} (z)$ from the Lyman-$\alpha$ data as a…

Cosmology and Nongalactic Astrophysics · Physics 2021-11-03 Anjan Kumar Sarkar , Kanhaiya L. Pandey , Shiv K. Sethi

This study sets new constraints on Cold+Warm Dark Matter (CWDM) models by leveraging the small-scale suppression of structure formation imprinted in the Lyman-$\alpha$ forest. Using the Sherwood-Relics suite, we extract high-fidelity flux…

Cosmology and Nongalactic Astrophysics · Physics 2025-08-29 Olga Garcia-Gallego , Vid Iršič , Martin G. Haehnelt , Matteo Viel , James S. Bolton

We examine the statistics of the low-redshift Lyman-alpha forest from smoothed particle hydrodynamic simulations in light of recent improvements in the estimated evolution of the cosmic ultraviolet background (UVB) and recent observations…

We present the first robust measurement of the one-dimensional Lyman alpha (Ly$\alpha$) forest bispectrum using the complete extended Baryon Oscillation Spectroscopic Survey (eBOSS) quasar sample, corresponding to the sixteenth data release…

Cosmology and Nongalactic Astrophysics · Physics 2024-10-15 Rodrigo de la Cruz , Gustavo Niz , Vid Iršič , Corentin Ravoux , César Ramírez-Pérez , Hiram K. Herrera-Alcantar

On large scales a nonlinear transformation of matter density field can be viewed as a biased tracer of the density field itself. A nonlinear transformation also modifies the redshift space distortions in the same limit, giving rise to a…

Cosmology and Nongalactic Astrophysics · Physics 2015-06-03 Uros Seljak

Correlations measured in three dimensions in the Lyman-alpha forest are contaminated by the presence of the damping wings of high column density (HCD) absorbing systems of neutral hydrogen (HI; having column densities $N(\mathrm{HI}) >…

Cosmology and Nongalactic Astrophysics · Physics 2018-04-17 Keir K. Rogers , Simeon Bird , Hiranya V. Peiris , Andrew Pontzen , Andreu Font-Ribera , Boris Leistedt