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This article is a partial answer to the question of which groups can be represented as isometry groups of formal languages for generalized Levenshtein distances. Namely, it is proved that for any language the modulus of the difference…

Group Theory · Mathematics 2022-05-18 Vladimir Yankovskiy

We introduce a general framework for analyzing data modeled as parameterized families of networks. Building on a Gromov-Wasserstein variant of optimal transport, we define a family of parameterized Gromov-Wasserstein distances for comparing…

Machine Learning · Statistics 2025-09-29 Mario Gómez , Guanqun Ma , Tom Needham , Bei Wang

This research project aimed to overcome the challenge of analysing human language relationships, facilitate the grouping of languages and formation of genealogical relationship between them by developing automated comparison techniques.…

Computation and Language · Computer Science 2020-02-03 Gabija Mikulyte , David Gilbert

A \emph{resolving set} $R$ in a graph $G$ is a set of vertices such that every vertex of $G$ is uniquely identified by its distances to the vertices of $R$. Introduced in the 1970s, this concept has been since then extensively studied from…

Combinatorics · Mathematics 2024-12-05 Jan Bok , Antoine Dailly , Tuomo Lehtilä

A set of vertices $S$ is a \emph{determining set} of a graph $G$ if every automorphism of $G$ is uniquely determined by its action on $S$. The \emph{determining number} of $G$ is the minimum cardinality of a determining set of $G$. This…

Combinatorics · Mathematics 2011-11-15 J. Cáceres , D. Garijo , A. González , A. Márquez , M. L. Puertas

The editing of a combinatorial object is the alteration of some of its elements such that the resulting object satisfies a certain fixed property. The edit problem for graphs, when the edges are added or deleted, was first studied…

Combinatorics · Mathematics 2016-05-24 Maria Axenovich , Ryan R. Martin

Similarity measures are used extensively in machine learning and data science algorithms. The newly proposed graph Relative Hausdorff (RH) distance is a lightweight yet nuanced similarity measure for quantifying the closeness of two graphs.…

Discrete Mathematics · Computer Science 2019-06-13 Sinan G. Aksoy , Kathleen E. Nowak , Emilie Purvine , Stephen J. Young

Graphs are fundamental tools for modeling pairwise interactions in complex systems. However, many real-world systems involve multi-way interactions that cannot be fully captured by standard graphs. Hypergraphs, which generalize graphs by…

Metric Geometry · Mathematics 2024-12-04 Tom Needham , Ethan Semrad

Levenshtein distance is a commonly used edit distance metric, typically applied in language processing, and to a lesser extent, in molecular biology analysis. Biological nucleic acid sequences are often embedded in longer sequences and are…

Quantitative Methods · Quantitative Biology 2023-10-20 Robert Logan , Amy W. Wehe , Dori C. Woods , Jon Tilly , Konstantin Khrapko

A novel Gromov-Wasserstein learning framework is proposed to jointly match (align) graphs and learn embedding vectors for the associated graph nodes. Using Gromov-Wasserstein discrepancy, we measure the dissimilarity between two graphs and…

Machine Learning · Computer Science 2019-05-08 Hongteng Xu , Dixin Luo , Hongyuan Zha , Lawrence Carin

Comparability graphs are graphs which have transitive orientations. The dimension of a poset is the least number of linear orders whose intersection gives this poset. The dimension ${\rm dim}(X)$ of a comparability graph $X$ is the…

Discrete Mathematics · Computer Science 2015-06-17 Pavel Klavík , Peter Zeman

A large driver of the complexity of graph learning is the interplay between structure and features. When analyzing the expressivity of graph neural networks, however, existing approaches ignore features in favor of structure, making it…

Machine Learning · Computer Science 2026-03-04 Martin Carrasco , Olga Zaghen , Kavir Sumaraj , Erik Bekkers , Bastian Rieck

Due to their capacity to encode rich structural information, labeled graphs are often used for modeling various kinds of objects such as images, molecules, and chemical compounds. If pattern recognition problems such as clustering and…

Data Structures and Algorithms · Computer Science 2019-08-02 David B. Blumenthal

We leverage an algorithm of Deming [R.W. Deming, Independence numbers of graphs -- an extension of the Koenig-Egervary theorem, Discrete Math., 27(1979), no. 1, 23--33; MR534950] to decompose a matchable graph into subgraphs with a precise…

Combinatorics · Mathematics 2022-05-24 P. Mark Kayll , Craig E. Larson

Main results of the paper: (1) For any finite metric space $M$ the Lipschitz free space on $M$ contains a large well-complemented subspace which is close to $\ell_1^n$. (2) Lipschitz free spaces on large classes of recursively defined…

Functional Analysis · Mathematics 2018-07-12 Stephen J. Dilworth , Denka Kutzarova , Mikhail I. Ostrovskii

Let $\Omega$ be a $m$-set, where $m>1$, is an integer. The Hamming graph $H(n,m)$, has $\Omega ^{n}$ as its vertex-set, with two vertices are adjacent if and only if they differ in exactly one coordinate. In this paper, we provide a proof…

Group Theory · Mathematics 2019-01-24 S. Morteza Mirafzal , Meysam Ziaee

The graph edit distance (GED) is a flexible distance measure which is widely used for inexact graph matching. Since its exact computation is NP-hard, heuristics are used in practice. A popular approach is to obtain upper bounds for GED via…

Data Structures and Algorithms · Computer Science 2021-01-29 David B. Blumenthal , Johann Gamper , Sébastien Bougleux , Luc Brun

We develop a new framework for generalizing approximation algorithms from the structural graph algorithm literature so that they apply to graphs somewhat close to that class (a scenario we expect is common when working with real-world…

In this paper, we propose a new type of graph, denoted as "embedded-graph", and its theory, which employs a distributed representation to describe the relations on the graph edges. Embedded-graphs can express linguistic and complicated…

Discrete Mathematics · Computer Science 2017-09-15 Atsushi Yokoyama

We introduce GSimCNN (Graph Similarity Computation via Convolutional Neural Networks) for predicting the similarity score between two graphs. As the core operation of graph similarity search, pairwise graph similarity computation is a…

Machine Learning · Computer Science 2018-11-15 Yunsheng Bai , Hao Ding , Yizhou Sun , Wei Wang