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The "pre-training then fine-tuning (FT)" paradigm is widely adopted to boost the model performance of deep learning-based methods for medical volumetric segmentation. However, conventional full FT incurs high computational and memory costs.…

Computer Vision and Pattern Recognition · Computer Science 2024-05-29 Jiachen Shen , Wenxuan Wang , Chen Chen , Jianbo Jiao , Jing Liu , Yan Zhang , Shanshan Song , Jiangyun Li

Breast lesion detection in ultrasound is critical for breast cancer diagnosis. Existing methods mainly rely on individual 2D ultrasound images or combine unlabeled video and labeled 2D images to train models for breast lesion detection. In…

Image and Video Processing · Electrical Eng. & Systems 2022-07-04 Zhi Lin , Junhao Lin , Lei Zhu , Huazhu Fu , Jing Qin , Liansheng Wang

Preterm infants (born between 28 and 37 weeks of gestation) face elevated risks of neurodevelopmental delays, making early identification crucial for timely intervention. While deep learning-based volumetric segmentation of brain MRI scans…

Computer Vision and Pattern Recognition · Computer Science 2026-01-21 Lexin Ren , Jiamiao Lu , Weichuan Zhang , Benqing Wu , Tuo Wang , Yi Liao , Jiapan Guo , Changming Sun , Liang Guo

Medical imaging datasets often contain heterogeneous biases ranging from erroneous labels to inconsistent labeling styles. Such biases can negatively impact deep segmentation networks performance. Yet, the identification and…

Computer Vision and Pattern Recognition · Computer Science 2025-06-27 Samuel Joutard , Marijn Stollenga , Marc Balle Sanchez , Mohammad Farid Azampour , Raphael Prevost

Deep learning has brought the most profound contribution towards biomedical image segmentation to automate the process of delineation in medical imaging. To accomplish such task, the models are required to be trained using huge amount of…

Image and Video Processing · Electrical Eng. & Systems 2022-03-25 Narinder Singh Punn , Sonali Agarwal

In the childbirth process, traditional methods involve invasive vaginal examinations, but research has shown that these methods are both subjective and inaccurate. Ultrasound-assisted diagnosis offers an objective yet effective way to…

Computer Vision and Pattern Recognition · Computer Science 2025-06-05 Zunhui Xia , Hongxing Li , Libin Lan

This paper describes our method for our participation in the FeTA challenge2021 (team name: TRABIT). The performance of convolutional neural networks for medical image segmentation is thought to correlate positively with the number of…

Image and Video Processing · Electrical Eng. & Systems 2021-11-05 Lucas Fidon , Michael Aertsen , Suprosanna Shit , Philippe Demaerel , Sébastien Ourselin , Jan Deprest , Tom Vercauteren

Fetal magnetic resonance imaging (MRI) is challenged by uncontrollable, large, and irregular fetal movements. It is, therefore, performed through visual monitoring of fetal motion and repeated acquisitions to ensure diagnostic-quality…

Image and Video Processing · Electrical Eng. & Systems 2020-06-09 Ayush Singh , Seyed Sadegh Mohseni Salehi , Ali Gholipour

Ultrasound (US) imaging is highly effective with regards to both cost and versatility in real-time diagnosis; however, determination of fetal gender by US scan in the early stages of pregnancy is also a cause of sex-selective abortion. This…

Accurate segmentation of the prostate is a key step in external beam radiation therapy treatments. In this paper, we tackle the challenging task of prostate segmentation in CT images by a two-stage network with 1) the first stage to fast…

Image and Video Processing · Electrical Eng. & Systems 2020-05-26 Kelei He , Chunfeng Lian , Bing Zhang , Xin Zhang , Xiaohuan Cao , Dong Nie , Yang Gao , Junfeng Zhang , Dinggang Shen

Heart murmurs are abnormal sounds caused by turbulent blood flow in the heart. Several diagnostic methods are available to detect heart murmurs and their severity, including cardiac auscultation, echocardiography, and phonocardiography…

Signal Processing · Electrical Eng. & Systems 2026-05-12 Md Jobayer , Md. Mehedi Hasan Shawon , Md Zakir Hossain , Shreya Ghosh , Imre Rudas , Tom Gedeon , Md Rakibul Hasan

Accurately segmenting blood vessels in retinal fundus images is crucial in the early screening, diagnosing, and evaluating some ocular diseases, yet it poses a nontrivial uncertainty for the segmentation task due to various factors such as…

Image and Video Processing · Electrical Eng. & Systems 2023-06-29 Yuanyuan Peng , Pengpeng Luan , Zixu Zhang

Machine Learning-based fast and quantitative automated screening plays a key role in analyzing human bones on Computed Tomography (CT) scans. However, despite the requirement in drug safety assessment, such research is rare on animal fetus…

Image and Video Processing · Electrical Eng. & Systems 2021-06-04 Akihiro Fukuda , Changhee Han , Kazumi Hakamada

Biomedical image segmentation is a critical task in medical diagnosis and treatment planning, enabling precise delineation of anatomical structures and pathological regions. Despite significant advancements, challenges persist due to the…

Computer Vision and Pattern Recognition · Computer Science 2026-05-22 Joao Batista Florindo , Amanda Pontes de Oliveira Ornelas

Detecting synaptic clefts is a crucial step to investigate the biological function of synapses. The volume electron microscopy (EM) allows the identification of synaptic clefts by photoing EM images with high resolution and fine details.…

Computer Vision and Pattern Recognition · Computer Science 2021-01-13 Yi Liu , Shuiwang Ji

Preterm birth is the most common cause of neonatal death. Current diagnostic methods that assess the risk of preterm birth involve the collection of maternal characteristics and transvaginal ultrasound imaging conducted in the first and…

Image and Video Processing · Electrical Eng. & Systems 2019-08-27 Tomasz Włodarczyk , Szymon Płotka , Tomasz Trzciński , Przemysław Rokita , Nicole Sochacki-Wójcicka , Michał Lipa , Jakub Wójcicki

Congenital Heart Disease (CHD) is a group of cardiac malformations present already during fetal life, representing the prevailing category of birth defects globally. Our aim in this study is to aid 3D fetal vessel topology visualisation in…

Magnetic Resonance Imaging (MRI) of the fetal brain has become a key tool for studying brain development in vivo. Yet, its assessment remains challenging due to variability in brain maturation, imaging protocols, and uncertain estimates of…

Image and Video Processing · Electrical Eng. & Systems 2025-10-09 Johannes Tischer , Patric Kienast , Marlene Stümpflen , Gregor Kasprian , Georg Langs , Roxane Licandro

During fetoscopic laser photocoagulation, a treatment for twin-to-twin transfusion syndrome (TTTS), the clinician first identifies abnormal placental vascular connections and laser ablates them to regulate blood flow in both fetuses. The…

Computer Vision and Pattern Recognition · Computer Science 2020-11-05 Sophia Bano , Francisco Vasconcelos , Luke M. Shepherd , Emmanuel Vander Poorten , Tom Vercauteren , Sebastien Ourselin , Anna L. David , Jan Deprest , Danail Stoyanov

The nnU-Net framework has played a crucial role in medical image segmentation and has become the gold standard in multitudes of applications targeting different diseases, organs, and modalities. However, so far it has been used primarily in…