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An information theoretic approach inspired by quantum statistical mechanics was recently proposed as a means to optimize network models and to assess their likelihood against synthetic and real-world networks. Importantly, this method does…

Statistical Mechanics · Physics 2018-09-12 Carlo Nicolini , Vladimir Vlasov , Angelo Bifone

Regulatory networks describe the interactions between molecular or cellular regulators, like transcription factors and genes in gene regulatory networks, kinases and their receptors in signalling networks, or neurons in neural networks. A…

Molecular Networks · Quantitative Biology 2022-12-29 Niklas Bonacker , Johannes Berg

Mean field theory models of percolation on networks provide analytic estimates of network robustness under node or edge removal. We introduce a new mean field theory model based on generating functions that includes information about the…

Physics and Society · Physics 2023-08-01 Chris Jones , Karoline Wiesner

In computer simulations of spiking neural networks, often it is assumed that every two neurons of the network are connected by a probability of 2\%, 20\% of neurons are inhibitory and 80\% are excitatory. These common values are based on…

Neurons and Cognition · Quantitative Biology 2015-03-06 Hamed Seyed-allaei

Interacting systems are prevalent in nature, from dynamical systems in physics to complex societal dynamics. The interplay of components can give rise to complex behavior, which can often be explained using a simple model of the system's…

Machine Learning · Statistics 2018-06-07 Thomas Kipf , Ethan Fetaya , Kuan-Chieh Wang , Max Welling , Richard Zemel

Mean-field limits have been used now as a standard tool in approximations, including for networks with a large number of nodes. Statistical inference on mean-filed models has attracted more attention recently mainly due to the rapid…

Statistics Theory · Mathematics 2024-11-21 Ioannis Lambadaris , Ahmed Sid-Ali , Wei Sun , Yiqiang Q. Zhao

Many systems with propagation dynamics, such as spike propagation in neural networks and spreading of infectious diseases, can be approximated by autoregressive models. The estimation of model parameters can be complicated by the…

Neurons and Cognition · Quantitative Biology 2021-01-01 Jorge de Heuvel , Jens Wilting , Moritz Becker , Viola Priesemann , Johannes Zierenberg

This paper models the dynamics of a large set of interacting neurons within the framework of statistical field theory. We use a method initially developed in the context of statistical field theory [44] and later adapted to complex systems…

Neurons and Cognition · Quantitative Biology 2022-05-25 Pierre Gosselin , Aïleen Lotz , Marc Wambst

Mean-Field is an efficient way to approximate a posterior distribution in complex graphical models and constitutes the most popular class of Bayesian variational approximation methods. In most applications, the mean field distribution…

Machine Learning · Computer Science 2015-02-23 Pierre Baqué , Jean-Hubert Hours , François Fleuret , Pascal Fua

We study the asymptotic behavior for asymmetric neuronal dynamics in a network of linear Hopfield neurons. The interaction between the neurons is modeled by random couplings which are centered i.i.d. random variables with finite moments of…

Probability · Mathematics 2020-06-08 Olivier Faugeras , Émilie Soret , Etienne Tanré

The Bayesian view of the brain hypothesizes that the brain constructs a generative model of the world, and uses it to make inferences via Bayes' rule. Although many types of approximate inference schemes have been proposed for hierarchical…

Neurons and Cognition · Quantitative Biology 2019-11-15 Shashwat Shukla , Hideaki Shimazaki , Udayan Ganguly

Oscillator networks with an asymmetric bipolar distribution of natural frequencies are useful representations of power grids. We propose a mean-field model that captures the onset, form and linear stability of frequency synchronization in…

Adaptation and Self-Organizing Systems · Physics 2018-05-30 Stefan Wieland , Simone Blanco Malerba , Sébastien Aumaitre , Hervé Bercegol

Interacting systems are prevalent in nature. It is challenging to accurately predict the dynamics of the system if its constituent components are analyzed independently. We develop a graph-based model that unveils the systemic interactions…

Machine Learning · Computer Science 2024-10-31 Giangiacomo Mercatali , Andre Freitas , Jie Chen

Inferring topological characteristics of complex networks from observed data is critical to understand the dynamical behavior of networked systems, ranging from the Internet and the World Wide Web to biological networks and social networks.…

Multiagent Systems · Computer Science 2020-05-13 Chunheng Jiang , Jianxi Gao , Malik Magdon-Ismail

Mechanistic models can provide an intuitive and interpretable explanation of network growth by specifying a set of generative rules. These rules can be defined by domain knowledge about real-world mechanisms governing network growth or may…

Social and Information Networks · Computer Science 2025-12-04 Maxwell H Wang , Till Hoffmann , Jukka-Pekka Onnela

Neural computations emerge from myriads of neuronal interactions occurring in intricate spiking networks. Due to the inherent complexity of neural models, relating the spiking activity of a network to its structure requires simplifying…

Dynamical Systems · Mathematics 2019-02-12 François Baccelli , Thibaud Taillefumier

We develop an elementary mean field approach for fully asymmetric kinetic Ising models, which can be applied to a single instance of the problem. In the case of the asymmetric SK model this method gives the exact values of the local…

Disordered Systems and Neural Networks · Physics 2015-05-27 M. Mezard , J. Sakellariou

We study causal effect estimation from observational data under interference. The interference pattern is captured by an observed network. We adopt the chain graph framework of Tchetgen Tchetgen et. al. (2021), which allows (i) interaction…

Statistics Theory · Mathematics 2024-07-30 Sohom Bhattacharya , Subhabrata Sen

Much progress has been made in uncovering the computational capabilities of spiking neural networks. However, spiking neurons will always be more expensive to simulate compared to rate neurons because of the inherent disparity in time…

Neurons and Cognition · Quantitative Biology 2013-10-31 Michael A. Buice , Carson C. Chow

Many methods have been proposed to quantify the predictive uncertainty associated with the outputs of deep neural networks. Among them, ensemble methods often lead to state-of-the-art results, though they require modifications to the…

Machine Learning · Computer Science 2021-05-11 Zhiyun Lu , Eugene Ie , Fei Sha