Related papers: Polynomial delay algorithm for minimal chordal com…
We present a novel algorithm for the minimum-depth elimination tree problem, which is equivalent to the optimal treedepth decomposition problem. Our algorithm makes use of two cheaply-computed lower bound functions to prune the search tree,…
A classical problem in Distance Geometry, with multiple practical applications (in molecular structure determination, sensor network localization etc.) is to find the possible placements of the vertices of a graph with given edge lengths.…
In 1996, Bodlaender showed the celebrated result that an optimal tree decomposition of a graph of bounded treewidth can be found in linear time. The algorithm is based on an algorithm of Bodlaender and Kloks that computes an optimal tree…
In this article, we give two extended space formulations, respectively, for the induced tree and path polytopes of chordal graphs with vertex and edge variables. These formulations are obtained by proving that the induced tree and path…
This paper deals with the problem of finding, for a given graph and a given natural number k, a subgraph of k nodes with a maximum number of edges. This problem is known as the k-cluster problem and it is NP-hard on general graphs as well…
A highly influential ingredient of many techniques designed to exploit sparsity in numerical optimization is the so-called chordal extension of a graph representation of the optimization problem. The definitive relation between chordal…
Enumerative kernelization is a recent promising at the intersection of parameterized complexity and enumeration algorithms, with two proposed models. The first, known as enum-kernels and due to Creignou et al., was too permissive, leading…
We present a complete algorithm for finding an exact minimal polynomial from its approximate value by using an improved parameterized integer relation construction method. Our result is superior to the existence of error controlling on…
The focus of this paper is two fold. Firstly, we present a logical approach to graph modification problems such as minimum node deletion, edge deletion, edge augmentation problems by expressing them as an expression in first order (FO)…
We present a parallel version of the cut-pursuit algorithm for minimizing functionals involving the graph total variation. We show that the decomposition of the iterate into constant connected components, which is at the center of this…
In this paper, we study a posteriori error estimators which aid multilevel iterative solvers for linear systems with graph Laplacians. In earlier works such estimates were computed by solving global optimization problems, which could be…
We consider the problem of learning a causal graph over a set of variables with interventions. We study the cost-optimal causal graph learning problem: For a given skeleton (undirected version of the causal graph), design the set of…
Containing many classic optimization problems, the family of vertex deletion problems has an important position in algorithm and complexity study. The celebrated result of Lewis and Yannakakis gives a complete dichotomy of their complexity.…
We present and analyse a Monte-Carlo algorithm to compute the minimal polynomial of an $n\times n$ matrix over a finite field that requires $O(n^3)$ field operations and O(n) random vectors, and is well suited for successful practical…
De Berg et al. in [SICOMP 2020] gave an algorithmic framework for subexponential algorithms on geometric graphs with tight (up to ETH) running times. This framework is based on dynamic programming on graphs of weighted treewidth resulting…
The Path Contraction and Cycle Contraction problems take as input an undirected graph $G$ with $n$ vertices, $m$ edges and an integer $k$ and determine whether one can obtain a path or a cycle, respectively, by performing at most $k$ edge…
In this paper we consider the problem of computing an mRNA sequence of maximal similarity for a given mRNA of secondary structure constraints, introduced by Backofen et al. in [BNS02] denoted as the MRSO problem. The problem is known to be…
In the Fully Leafed Induced Subtrees, one is given a graph $G$ and two integers $a$ and $b$ and the question is to find an induced subtree of $G$ with $a$ vertices and at least $b$ leaves. This problem is known to be NP-complete even when…
A graph is chordal if it contains no induced cycle of length four or more. While finite chordal graphs are precisely those admitting tree-decompositions into cliques, this fails for infinite graphs. We establish two results extending the…
Let $G$ be a graph and $a,b$ vertices of $G$. A minimal $a,b$-separator of $G$ is an inclusion-wise minimal vertex set of $G$ that separates $a$ and $b$. We consider the problem of enumerating the minimal $a,b$-separators of $G$ that…