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This paper presents a new mesh segmentation method that integrates geometrical and topological features through a flexible Reeb graph representation. The algorithm consists of three phases: construction of the Reeb graph using the improved…

Graphics · Computer Science 2025-01-22 Florian Beguet , Sandrine Lanquetin , Romain Raffin

Solving optimization tasks based on functions and losses with a topological flavor is a very active, growing field of research in data science and Topological Data Analysis, with applications in non-convex optimization, statistics and…

Computational Geometry · Computer Science 2021-02-19 Mathieu Carrière , Frédéric Chazal , Marc Glisse , Yuichi Ike , Hariprasad Kannan

We consider the setting of Reeb graphs of piecewise linear functions and study distances between them that are stable, meaning that functions which are similar in the supremum norm ought to have similar Reeb graphs. We define an edit…

Algebraic Topology · Mathematics 2021-02-09 Ulrich Bauer , Claudia Landi , Facundo Memoli

We study the crossing-minimization problem in a layered graph drawing of planar-embedded rooted trees whose leaves have a given total order on the first layer, which adheres to the embedding of each individual tree. The task is then to…

Discrete Mathematics · Computer Science 2024-02-29 Julia Katheder , Stephen G. Kobourov , Axel Kuckuk , Maximilian Pfister , Johannes Zink

Persistence diagrams are important tools in the field of topological data analysis that describe the presence and magnitude of features in a filtered topological space. However, current approaches for comparing a persistence diagram to a…

Computational Geometry · Computer Science 2021-03-24 Brittany Terese Fasy , Xiaozhou He , Zhihui Liu , Samuel Micka , David L. Millman , Binhai Zhu

The Reeb space of a continuous map is the space of all (elements representing) connected components of preimages endowed with the quotient topology induced from the natural equivalence relation on the domain. These objects are strong tools…

General Topology · Mathematics 2021-06-15 Naoki Kitazawa

The restoration lemma by Afek, Bremler-Barr, Kaplan, Cohen, and Merritt [Dist. Comp. '02] proves that, in an undirected unweighted graph, any replacement shortest path avoiding a failing edge can be expressed as the concatenation of two…

Data Structures and Algorithms · Computer Science 2023-06-06 Greg Bodwin , Merav Parter

The extended persistence diagram is an invariant of piecewise linear functions, which is known to be stable under perturbations of functions with respect to the bottleneck distance as introduced by Cohen-Steiner, Edelsbrunner, and Harer. We…

Algebraic Topology · Mathematics 2024-07-08 Ulrich Bauer , Magnus Bakke Botnan , Benedikt Fluhr

Reeb spaces of (continuous) real-valued functions on (nice) topological spaces are the spaces whose underlying sets consist of all connected components (contours) of their level sets and seen naturally as quotient spaces of the spaces. They…

General Topology · Mathematics 2026-03-13 Naoki Kitazawa

Reeb spaces of continuous real-valued functions on topological spaces are fundamental and strong tools in investigating the spaces. The Reeb space is the natural quotient space of the space of the domain represented by connected components…

Algebraic Geometry · Mathematics 2026-05-13 Naoki Kitazawa

The graph-navigability problem concerns how one can find as short paths as possible between a pair of vertices, given an incomplete picture of a graph. We study the navigability of graphs where the vertices are tagged by a number (between 1…

Physics and Society · Physics 2011-08-25 Sang Hoon Lee , Petter Holme

Persistent cycles, especially the minimal ones, are useful geometric features functioning as augmentations for the intervals in a purely topological persistence diagram (also termed as barcode). In our earlier work, we showed that computing…

Computational Geometry · Computer Science 2020-02-18 Tamal K. Dey , Tao Hou , Sayan Mandal

Computing paths in graph structures is a fundamental operation in a wide range of applications, from transportation networks to data analysis. The beer path problem, which captures the option of visiting points of interest, such as gas…

Data Structures and Algorithms · Computer Science 2026-04-07 Andrea D'Ascenzo , Giuseppe F. Italiano , Sotiris Kanellopoulos , Anna Mpanti , Aris Pagourtzis , Christos Pergaminelis

This article aims to study the topological invariant properties encoded in node graph representational embeddings by utilizing tools available in persistent homology. Specifically, given a node embedding representation algorithm, we…

Machine Learning · Computer Science 2021-10-12 Mustafa Hajij , Ghada Zamzmi , Xuanting Cai

The method is based on the preliminary transformation of the traditionally used matrices or adjacency lists in the graph theory into refined projections free from redundant information, and their subsequent use in constructing shortest…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-10-25 V. A. Melent'ev

In graph learning, maps between graphs and their subgraphs frequently arise. For instance, when coarsening or rewiring operations are present along the pipeline, one needs to keep track of the corresponding nodes between the original and…

Machine Learning · Computer Science 2023-02-01 Marco Pegoraro , Riccardo Marin , Arianna Rampini , Simone Melzi , Luca Cosmo , Emanuele Rodolà

When using graphs and graph transformations to model systems, consistency is an important concern. While consistency has primarily been viewed as a binary property, i.e., a graph is consistent or inconsistent with respect to a set of…

Software Engineering · Computer Science 2026-03-11 Lars Fritsche , Alexander Lauer , Maximilian Kratz , Andy Schürr , Gabriele Taentzer

Graphs face challenges when dealing with massive datasets. They are essential tools for modeling interconnected data and often become computationally expensive. Graph embedding techniques, on the other hand, provide an efficient approach.…

Databases · Computer Science 2024-12-16 Plácido A Souza Neto

For a smooth function on a smooth manifold of a suitable class, the space of all connected components of preimages is the graph and called the {\it Reeb graph}. Reeb graphs are fundamental tools in the algebraic and differential topological…

Geometric Topology · Mathematics 2022-03-28 Naoki Kitazawa

In recent years, there has been significant interest in characterizing the induced subgraph obstructions to bounded treewidth and pathwidth. While this has recently been resolved for pathwidth, the case of treewidth remains open, and prior…

Combinatorics · Mathematics 2025-07-31 Maria Chudnovsky , David Fischer , Sepehr Hajebi , Sophie Spirkl , Bartosz Walczak