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We consider the problem of learning causal structures in sparse high-dimensional settings that may be subject to the presence of (potentially many) unmeasured confounders, as well as selection bias. Based on the structure found in common…

Methodology · Statistics 2021-10-04 Wenyu Chen , Mathias Drton , Ali Shojaie

Phylogenetic inference, the task of reconstructing how related sequences evolved from common ancestors, is a central objective in evolutionary genomics. The current state-of-the-art methods exploit probabilistic models of sequence evolution…

Populations and Evolution · Quantitative Biology 2026-02-19 Luc Blassel , Noémie Sauvage , Pierre Barrat-Charlaix , Bastien Boussau , Nicolas Lartillot , Laurent Jacob

Despite their widespread applications, Large Language Models (LLMs) often struggle to express uncertainty, posing a challenge for reliable deployment in high stakes and safety critical domains like clinical diagnostics. Existing standard…

Machine Learning · Computer Science 2025-09-25 Mridul Sharma , Adeetya Patel , Zaneta D' Souza , Samira Abbasgholizadeh Rahimi , Siva Reddy , Sreenath Madathil

Multivariate time series imputation is fundamental in applications such as healthcare, traffic forecasting, and biological modeling, where sensor failures and irregular sampling lead to pervasive missing values. However, existing…

Machine Learning · Computer Science 2025-12-18 Runze Li , Hanchen Wang , Wenjie Zhang , Binghao Li , Yu Zhang , Xuemin Lin , Ying Zhang

What, if anything, should a frequentist say about a single realized confidence interval (CI) and its chance of having covered the parameter? Jerzy Neyman's original answer was to refuse any nondegenerate probability for coverage ex post…

Other Statistics · Statistics 2026-03-06 Scott Lee

Neural simulation-based inference is a powerful class of machine-learning-based methods for statistical inference that naturally handles high-dimensional parameter estimation without the need to bin data into low-dimensional summary…

Data Analysis, Statistics and Probability · Physics 2025-06-16 ATLAS Collaboration

Laplace Neural Operators (LNOs) have recently emerged as a promising approach in scientific machine learning due to the ability to learn nonlinear maps between functional spaces. However, this framework often requires substantial amounts of…

Machine Learning · Computer Science 2025-02-04 Haoyang Zheng , Guang Lin

Many models of interest in the natural and social sciences have no closed-form likelihood function, which means that they cannot be treated using the usual techniques of statistical inference. In the case where such models can be…

Computation · Statistics 2012-07-19 Simon Barthelmé , Nicolas Chopin

We propose a framework for general Bayesian inference. We argue that a valid update of a prior belief distribution to a posterior can be made for parameters which are connected to observations through a loss function rather than the…

Statistics Theory · Mathematics 2016-02-29 Pier Giovanni Bissiri , Chris Holmes , Stephen Walker

Models implicitly defined through a random simulator of a process have become widely used in scientific and industrial applications in recent years. However, simulation-based inference methods for such implicit models, like approximate…

Methodology · Statistics 2025-04-17 Joonha Park

A great deal of interest has recently focused on conducting inference on the parameters in a high-dimensional linear model. In this paper, we consider a simple and very na\"{i}ve two-step procedure for this task, in which we (i) fit a lasso…

Methodology · Statistics 2020-07-02 Sen Zhao , Daniela Witten , Ali Shojaie

Transformation-based methods have been an attractive approach in non-parametric inference for problems such as unconditional and conditional density estimation due to their unique hierarchical structure that models the data as flexible…

Statistics Theory · Mathematics 2020-11-06 Sean Plummer , Shuang Zhou , Anirban Bhattacharya , David Dunson , Debdeep Pati

Linear models are foundational tools in statistics and ubiquitous across the applied sciences. However, conventional statistical inference -- such as $t$-tests and $F$-tests -- are only valid at fixed sample sizes, making them unsuitable…

Methodology · Statistics 2025-07-08 Michael Lindon , Dae Woong Ham , Martin Tingley , Iavor Bojinov

Performing inference over simulators is generally intractable as their runtime means we cannot compute a marginal likelihood. We develop a likelihood-free inference method to infer parameters for a cardiac simulator, which replicates…

Machine Learning · Statistics 2017-12-12 Adam McCarthy , Blanca Rodriguez , Ana Minchole

Verifying the credibility of Cyber Threat Intelligence (CTI) is essential for reliable cybersecurity defense. However, traditional approaches typically treat this task as a static classification problem, relying on handcrafted features or…

Cryptography and Security · Computer Science 2025-07-16 Fengxiao Tang , Huan Li , Ming Zhao , Zongzong Wu , Shisong Peng , Tao Yin

Latent autoregressive models are useful time series models for the analysis of infectious disease data. Evaluation of the likelihood function of latent autoregressive models is intractable and its approximation through simulation-based…

Methodology · Statistics 2020-06-23 Xanthi Pedeli , Cristiano Varin

We develop a likelihood methodology which can be used to search for evidence of burst repetition in the BATSE catalog, and to study the properties of the repetition signal. We use a simplified model of burst repetition in which a number…

Astrophysics · Physics 2009-10-28 Carlo Graziani , Donald Q. Lamb

Measurement error in count data is common but underexplored in the literature, particularly in contexts where observed scores are bounded and arise from discrete scoring processes. Motivated by applications in oral reading fluency…

Methodology · Statistics 2025-06-26 Yuqiu Yang , Christina Vu , Cornelis J. Potgieter , Xinlei Wang , Akihito Kamata

In machine learning (ML) verification, the majority of procedures are non-quantitative and therefore cannot be used for verifying probabilistic models, or be applied in domains where hard guarantees are practically unachievable. The…

Artificial Intelligence · Computer Science 2024-10-24 Paolo Morettin , Andrea Passerini , Roberto Sebastiani

Likelihood-free inference is quickly emerging as a powerful tool to perform fast/effective parameter estimation. We demonstrate a technique of optimizing likelihood-free inference to make it even faster by marginalizing symmetries in a…

Machine Learning · Computer Science 2023-12-14 Deep Chatterjee , Philip C. Harris , Maanas Goel , Malina Desai , Michael W. Coughlin , Erik Katsavounidis