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Connected acyclic graphs (trees) are data objects that hierarchically organize categories. Collections of trees arise in a diverse variety of fields, including evolutionary biology, public health, machine learning, social sciences and…

Methodology · Statistics 2025-12-01 Maria Alejandra Valdez Cabrera , Amy D Willis , Armeen Taeb

Tree containment problem is a fundamental problem in phylogenetic study, as it is used to verify a network model. It asks whether a given network contain a subtree that resembles a binary tree. The problem is NP-complete in general, even in…

Populations and Evolution · Quantitative Biology 2017-02-15 Andreas Gunawan

We present a new approach to the following meta-problem: given a quantitative property of trees, design a type system such that the desired property for the tree generated by an infinitary ground $\lambda$-term corresponds to some property…

Logic in Computer Science · Computer Science 2017-01-20 Paweł Parys

In phylogenetics, a central problem is to infer the evolutionary relationships between a set of species $X$; these relationships are often depicted via a phylogenetic tree -- a tree having its leaves univocally labeled by elements of $X$…

Data Structures and Algorithms · Computer Science 2016-04-12 Julien Baste , Christophe Paul , Ignasi Sau , Celine Scornavacca

Decision trees are popular classification models, providing high accuracy and intuitive explanations. However, as the tree size grows the model interpretability deteriorates. Traditional tree-induction algorithms, such as C4.5 and CART,…

Machine Learning · Computer Science 2022-11-29 Guangyi Zhang , Aristides Gionis

This paper proposes a definition of recognizable transducers over monads and comonads, which bridges two important ongoing efforts in the current research on regularity. The first effort is the study of regular transductions, which extends…

Formal Languages and Automata Theory · Computer Science 2024-07-04 Rafał Stefański

This paper tackles the problem of the existence of solutions for recursive systems of Horn clauses with second-order variables interpreted as integer relations, and harnessed by quantifier-free difference bounds arithmetic. We start by…

Formal Languages and Automata Theory · Computer Science 2016-02-16 Radu Iosif

A decision tree looks like a simple directed acyclic computational graph, where only the leaf nodes specify the output values and the non-terminals specify their tests or split conditions. From the numerical perspective, we express decision…

Machine Learning · Computer Science 2024-11-07 Jinxiong Zhang

Program translation is an important tool to migrate legacy code in one language into an ecosystem built in a different language. In this work, we are the first to employ deep neural networks toward tackling this problem. We observe that…

Artificial Intelligence · Computer Science 2018-10-29 Xinyun Chen , Chang Liu , Dawn Song

Tree adjoining grammars (TAGs) provide an ample tool to capture syntax of many Indian languages. Tamil represents a special challenge to computational formalisms as it has extensive agglutinative morphology and a comparatively difficult…

Computation and Language · Computer Science 2017-04-20 Vijay Krishna Menon , S Rajendran , M Anandkumar , K P Soman

We study pushdown vector addition systems, which are synchronized products of pushdown automata with vector addition systems. The question of the boundedness of the reachability set for this model can be refined into two decision problems…

Formal Languages and Automata Theory · Computer Science 2015-07-28 Jérôme Leroux , Grégoire Sutre , Patrick Totzke

The tree share structure proposed by Dockins et al. is an elegant model for tracking disjoint ownership in concurrent separation logic, but decision procedures for tree shares are hard to implement due to a lack of a systematic theoretical…

Logic in Computer Science · Computer Science 2020-10-19 Xuan-Bach Le , Aquinas Hobor , Anthony W. Lin

Given a logic presented in a sequent calculus, a natural question is that of equivalence of proofs: to determine whether two given proofs are equated by any denotational semantics, ie any categorical interpretation of the logic compatible…

Logic in Computer Science · Computer Science 2019-03-14 Marc Bagnol

Decision trees are ubiquitous in machine learning for their ease of use and interpretability. Yet, these models are not typically employed in reinforcement learning as they cannot be updated online via stochastic gradient descent. We…

Machine Learning · Computer Science 2020-06-29 Andrew Silva , Taylor Killian , Ivan Dario Jimenez Rodriguez , Sung-Hyun Son , Matthew Gombolay

We address an open question of Francis and Steel about phylogenetic networks and trees. They give a polynomial time algorithm to decide if a phylogenetic network, N, is tree-based and pose the problem: given a fixed tree T and network N, is…

Notwithstanding recent advances, syntactic generalization remains a challenge for text decoders. While some studies showed gains from incorporating source-side symbolic syntactic and semantic structure into text generation Transformers,…

Computation and Language · Computer Science 2022-11-02 Leshem Choshen , Omri Abend

A phylogenetic tree shows the evolutionary relationships among species. Internal nodes of the tree represent speciation events and leaf nodes correspond to species. A goal of phylogenetics is to combine such trees into larger trees, called…

Artificial Intelligence · Computer Science 2014-01-16 Neil C. A. Moore , Patrick Prosser

Attributed tree transducers (atts) have been equipped with regular look-around (i.e., a preprocessing via an attributed relabeling) in order to obtain a more robust class of translations. Here we give further evidence of this robustness: we…

Formal Languages and Automata Theory · Computer Science 2024-06-12 Sebastian Maneth , Martin Vu

In sentence modeling and classification, convolutional neural network approaches have recently achieved state-of-the-art results, but all such efforts process word vectors sequentially and neglect long-distance dependencies. To exploit both…

Computation and Language · Computer Science 2015-08-04 Mingbo Ma , Liang Huang , Bing Xiang , Bowen Zhou

The cellular tree classifier model addresses a fundamental problem in the design of classifiers for a parallel or distributed computing world: Given a data set, is it sufficient to apply a majority rule for classification, or shall one…

Machine Learning · Statistics 2013-06-26 Gérard Biau , Luc Devroye