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The profile of research software engineering has been greatly enhanced by developments at institutions around the world to form groups and communities that can support effective, sustainable development of research software. We observe,…

Software Engineering · Computer Science 2019-08-07 Jeremy Cohen , Daniel S. Katz , Michelle Barker , Robert Haines , Neil Chue Hong

Refactoring is a common practice in software development, aimed at improving the internal code structure in order to make it easier to understand and modify. Consequently, it is often assumed that refactoring makes the code less prone to…

Software Engineering · Computer Science 2025-05-14 Isabella Ferreira , Lawrence Arkoh , Anderson Uchôa , Ana Carla Bibiano , Alessandro Garcia , Wesley K. G. Assunção

Clustering is a popular data mining technique that aims to partition an input space into multiple homogeneous regions. There exist several clustering algorithms in the literature. The performance of a clustering algorithm depends on its…

Human-Computer Interaction · Computer Science 2020-08-20 Sudip Poddar , Anirban Mukhopadhyay

This paper introduces the notion of co-modularity, to co-cluster observations of bipartite networks into co-communities. The task of co-clustering is to group together nodes of one type with nodes of another type, according to the…

Methodology · Statistics 2021-11-09 Thomas E. Bartlett

Biclustering algorithms play a central role in the biotechnological and biomedical domains. The knowledge extracted supports the extraction of putative regulatory modules, essential to understanding diseases, aiding therapy research, and…

Databases · Computer Science 2022-12-13 Leonardo Alexandre , Rafael S. Costa , Rui Henriques

Comprehensive benchmarking of clustering algorithms is rendered difficult by two key factors: (i)~the elusiveness of a unique mathematical definition of this unsupervised learning approach and (ii)~dependencies between the generating models…

Neural and Evolutionary Computing · Computer Science 2022-01-11 Cameron Shand , Richard Allmendinger , Julia Handl , Andrew Webb , John Keane

Refactoring is a maintenance activity that aims to improve design quality while preserving the behavior of a system. Several (semi)automated approaches have been proposed to support developers in this maintenance activity, based on the…

Software Engineering · Computer Science 2019-05-20 Rodrigo Morales , Foutse Khomh , Giuliano Antoniol

Subspace clustering refers to the problem of segmenting data drawn from a union of subspaces. State-of-the-art approaches for solving this problem follow a two-stage approach. In the first step, an affinity matrix is learned from the data…

Computer Vision and Pattern Recognition · Computer Science 2017-04-06 Chun-Guang Li , Chong You , René Vidal

Goal: We consider the problem of automatically grouping logs of runs that failed for the same underlying reasons, so that they can be treated more effectively, and investigate the following questions: (1) Does an approach developed to…

Software Engineering · Computer Science 2020-09-08 Carl Martin Rosenberg , Leon Moonen

Clustering is an important part of many modern data analysis pipelines, including network analysis and data retrieval. There are many different clustering algorithms developed by various communities, and it is often not clear which…

Machine Learning · Computer Science 2019-10-04 Maria-Florina Balcan , Travis Dick , Manuel Lang

Many networks of interest in the sciences, including a variety of social and biological networks, are found to divide naturally into communities or modules. The problem of detecting and characterizing this community structure has attracted…

Data Analysis, Statistics and Probability · Physics 2007-05-23 M. E. J. Newman

The clustering technique has attracted a lot of attention as a promising strategy for parallel debugging in multi-fault scenarios, this heuristic approach (i.e., failure indexing or fault isolation) enables developers to perform multiple…

Software Engineering · Computer Science 2022-07-20 Yi Song , Xiaoyuan Xie , Quanming Liu , Xihao Zhang , Xi Wu

A number of machine learning models have been proposed with the goal of achieving systematic generalization: the ability to reason about new situations by combining aspects of previous experiences. These models leverage compositional…

Machine Learning · Computer Science 2024-09-24 Devon Jarvis , Richard Klein , Benjamin Rosman , Andrew M. Saxe

Fixing software bugs and adding new features are two of the major maintenance tasks. Software bugs and features are reported as change requests. Developers consult these requests and often choose a few keywords from them as an ad hoc query.…

Software Engineering · Computer Science 2023-06-12 Mohammad Masudur Rahman , Chanchal K. Roy

Classical erasure codes, e.g. Reed-Solomon codes, have been acknowledged as an efficient alternative to plain replication to reduce the storage overhead in reliable distributed storage systems. Yet, such codes experience high overhead…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-06-20 Anne-Marie Kermarrec , Erwan Le Merrer , Gilles Straub , Alexandre van Kempen

We compare the performance of different clustering algorithms applied to the task of unsupervised text categorization. We consider agglomerative clustering algorithms, principal direction divisive partitioning and (for the first time)…

Disordered Systems and Neural Networks · Physics 2007-05-23 D. Volk , M. G. Stepanov

Reading computer program code and documentation written by others is, we are told, one of the best ways to learn the art of writing intelligible and maintainable code and documentation. The software resurrection exercise, introduced in this…

Software Engineering · Computer Science 2022-09-13 Abhishek Dutta

Subspace clustering (SC) is a popular method for dimensionality reduction of high-dimensional data, where it generalizes Principal Component Analysis (PCA). Recently, several methods have been proposed to enhance the robustness of PCA and…

Data Structures and Algorithms · Computer Science 2015-06-09 Sanghyuk Chun , Yung-Kyun Noh , Jinwoo Shin

In this paper, we discuss the problem of the software engineering of a class of business spreadsheet models. A methodology for structured software development is proposed, which is based on structured analysis of data, represented as…

Software Engineering · Computer Science 2008-05-29 Brian Knight , David Chadwick , Kamalesen Rajalingham

Spectral clustering methods have gained widespread recognition for their effectiveness in clustering high-dimensional data. Among these techniques, constrained spectral clustering has emerged as a prominent approach, demonstrating enhanced…

Machine Learning · Computer Science 2024-04-05 Swarup Ranjan Behera , Vijaya V. Saradhi