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Background and objective: Prior probability shift between training and deployment datasets challenges deep learning-based medical image classification. Standard correction methods reweight posterior probabilities to adjust prior bias, yet…

Quantitative Methods · Quantitative Biology 2025-11-06 Takaaki Tachibana , Toru Nagasaka , Yukari Adachi , Hiroki Kagiyama , Ryota Ito , Mitsugu Fujita , Kimihiro Yamashita , Yoshihiro Kakeji

Deep neural networks paved the way for significant improvements in image visual categorization during the last years. However, even though the tasks are highly varying, differing in complexity and difficulty, existing solutions mostly build…

Machine Learning · Computer Science 2019-10-29 Mina Basirat , Peter M. Roth

The notions of distance and similarity play a key role in many machine learning approaches, and artificial intelligence (AI) in general, since they can serve as an organizing principle by which individuals classify objects, form concepts…

Artificial Intelligence · Computer Science 2020-02-19 Santiago Ontañón

Recursive processing in sentence comprehension is considered a hallmark of human linguistic abilities. However, its underlying neural mechanisms remain largely unknown. We studied whether a modern artificial neural network trained with…

Computation and Language · Computer Science 2021-05-04 Yair Lakretz , Dieuwke Hupkes , Alessandra Vergallito , Marco Marelli , Marco Baroni , Stanislas Dehaene

Tests of independence are an important tool in applications, specifically in connection with the detection of a relationship between variables; they also have initiated many developments in statistical theory. In the present paper we build…

Statistics Theory · Mathematics 2026-05-13 L. Baringhaus , R. Grübel

This paper presents a novel evaluation approach to text-based speaker diarization (SD), tackling the limitations of traditional metrics that do not account for any contextual information in text. Two new metrics are proposed, Text-based…

Computation and Language · Computer Science 2023-09-15 Chen Gong , Peilin Wu , Jinho D. Choi

In various web applications like targeted advertising and recommender systems, the available categorical features (e.g., product type) are often of great importance but sparse. As a widely adopted solution, models based on Factorization…

Machine Learning · Computer Science 2019-11-19 Tong Chen , Hongzhi Yin , Quoc Viet Hung Nguyen , Wen-Chih Peng , Xue Li , Xiaofang Zhou

We present semantic correctness proofs of forward-mode Automatic Differentiation (AD) for languages with sources of partiality such as partial operations, lazy conditionals on real parameters, iteration, and term and type recursion. We…

Programming Languages · Computer Science 2024-05-28 Matthijs Vákár

Classifying genome sequences based on metadata has been an active area of research in comparative genomics for decades with many important applications across the life sciences. Established methods for classifying genomes can be broadly…

Genomics · Quantitative Biology 2025-01-17 Wan He , Tina Eliassi-Rad , Samuel V. Scarpino

Supervised fine-tuning (SFT) is a critical step in aligning large language models (LLMs) with human instructions and values, yet many aspects of SFT remain poorly understood. We trained a wide range of base models on a variety of datasets…

Computation and Language · Computer Science 2025-10-31 Yuto Harada , Yusuke Yamauchi , Yusuke Oda , Yohei Oseki , Yusuke Miyao , Yu Takagi

In this paper, we explore how different selections of basis functions impact the efficacy of frequency domain techniques in statistical independence tests, and study different algorithms for extracting low-dimensional algebraic relations…

Numerical Analysis · Mathematics 2025-12-02 Juan Shi , Wenbo Wang , Wan Zhang , Han Bao , Sergio Chavez , Jingfang Huang , Yichao Wu , Kai Zhang

While progress has been made in identifying common genetic variants associated with human diseases, for most of common complex diseases, the identified genetic variants only account for a small proportion of heritability. Challenges remain…

Applications · Statistics 2025-08-18 Olga A. Vsevolozhskaya , Dmitri V. Zaykin , Mark C. Greenwood , Changshuai Wei , Qing Lu

Many text generation applications require the generated text to be factually consistent with input information. Automatic evaluation of factual consistency is challenging. Previous work has developed various metrics that often depend on…

Computation and Language · Computer Science 2023-05-29 Yuheng Zha , Yichi Yang , Ruichen Li , Zhiting Hu

Large language models excel at complex instructions yet struggle to deviate from their helpful assistant persona, as post-training instills strong priors that resist conflicting instructions. We introduce system prompt strength, a…

Computation and Language · Computer Science 2026-01-13 Yijiang River Dong , Tiancheng Hu , Zheng Hui , Nigel Collier

In many longitudinal settings, time-varying covariates may not be measured at the same time as responses and are often prone to measurement error. Naive last-observation-carried-forward methods incur estimation biases, and existing…

Methodology · Statistics 2023-03-10 Xinyue Chang , Yehua Li , Yi Li

Given a database and a target attribute of interest, how can we tell whether there exists a functional, or approximately functional dependence of the target on any set of other attributes in the data? How can we reliably, without bias to…

Databases · Computer Science 2017-06-20 Panagiotis Mandros , Mario Boley , Jilles Vreeken

The model-X conditional randomization test is a generic framework for conditional independence testing, unlocking new possibilities to discover features that are conditionally associated with a response of interest while controlling type-I…

Machine Learning · Computer Science 2023-02-21 Shalev Shaer , Yaniv Romano

Learning problems in the text processing domain often map the text to a space whose dimensions are the measured features of the text, e.g., its words. Three characteristic properties of this domain are (a) very high dimensionality, (b) both…

cmp-lg · Computer Science 2008-02-03 Ido Dagan , Yael Karov , Dan Roth

In a case-control study aimed at localizing disease variants, association between a marker and the disease status is often tested by comparing the marker allele frequencies among cases and controls. These marker allele frequencies are…

Methodology · Statistics 2015-09-22 M. A. Jonker , M. W. T. Tanck

We propose a dynamic allocation procedure that increases power and efficiency when measuring an average treatment effect in sequential randomized trials. Subjects arrive iteratively and are either randomized or paired via a matching…

Methodology · Statistics 2013-05-23 Adam Kapelner , Abba Krieger