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Related papers: Web-based Structural Identifiability Analyzer

200 papers

The formal specification and verification of machine learning programs saw remarkable progress in less than a decade, leading to a profusion of tools. However, diversity may lead to fragmentation, resulting in tools that are difficult to…

Software Engineering · Computer Science 2026-01-21 Michele Alberti , François Bobot , Julien Girard-Satabin , Alban Grastien , Aymeric Varasse , Zakaria Chihani

The bifactor model and its extensions are multidimensional latent variable models, under which each item measures up to one subdimension on top of the primary dimension(s). Despite their wide applications to educational and psychological…

Statistics Theory · Mathematics 2020-12-23 Guanhua Fang , Xin Xu , Jinxin Guo , Zhiliang Ying , Susu Zhang

Mechanistic mathematical models of biological systems usually contain a number of unknown parameters whose values need to be estimated from available experimental data in order for the models to be validated and used to make quantitative…

Quantitative Methods · Quantitative Biology 2025-06-16 Yue Liu , Philip K. Maini , Ruth E. Baker

Estimating and quantifying uncertainty in unknown system parameters from limited data remains a challenging inverse problem in a variety of real-world applications. While many approaches focus on estimating constant parameters, a subset of…

Methodology · Statistics 2023-05-09 Andrea Arnold

We present a novel parameter identification algorithm for the estimation of parameters in models of cell motility using imaging data of migrating cells. Two alternative formulations of the objective functional that measures the difference…

Conditions are presented for different types of identifiability of discrete variable models generated over an undirected graph in which one node represents a binary hidden variable. These models can be seen as extensions of the latent class…

Methodology · Statistics 2013-12-12 Elena Stanghellini , Barbara Vantaggi

We introduce and analyze a method of learning-informed parameter identification for partial differential equations (PDEs) in an all-at-once framework. The underlying PDE model is formulated in a rather general setting with three unknowns:…

Optimization and Control · Mathematics 2023-08-25 Christian Aarset , Martin Holler , Tram Thi Ngoc Nguyen

In this paper, we study optimization problems where the cost function contains time-varying parameters that are unmeasurable and evolve according to linear, yet unknown, dynamics. We propose a solution that leverages control theoretic tools…

Optimization and Control · Mathematics 2025-03-20 Shivanshu Tripathi , Abed AlRahman Al Makdah , Fabio Pasqualetti

Modelling, parameter identification, and simulation play an important role in systems biology. Usually, the goal is to determine parameter values that minimise the difference between experimental measurement values and model predictions in…

Mathematical Software · Computer Science 2013-04-10 Thomas Dierkes , Susanna Röblitz , Moritz Wade , Peter Deuflhard

The structural analysis of shape boundaries leads to the characterization of objects as well as to the understanding of shape properties. The literature on graphs and networks have contributed to the structural characterization of shapes…

Computer Vision and Pattern Recognition · Computer Science 2017-11-15 Gisele H. B. Miranda , Jeaneth Machicao , Odemir M. Bruno

A recent development in data-driven modelling addresses the problem of identifying dynamic models of interconnected systems, represented as linear dynamic networks. For these networks the notion network identifiability has been introduced…

Systems and Control · Computer Science 2018-03-08 Harm Weerts , Paul M. J. Van den Hof , Arne Dankers

This paper explores the identification and estimation of nonseparable panel data models. We show that the structural function is nonparametrically identified when it is strictly increasing in a scalar unobservable variable, the conditional…

Methodology · Statistics 2018-11-09 Takuya Ishihara

In this paper we introduce paraglide, a visualization system designed for interactive exploration of parameter spaces of multi-variate simulation models. To get the right parameter configuration, model developers frequently have to go back…

Systems and Control · Computer Science 2011-10-25 Steven Bergner , Michael Sedlmair , Sareh Nabi , Ahmed Saad , Torsten Möller

Property Directed Reachability (PDR) is a powerful algorithm for formal verification of hardware and software systems, but its performance is highly sensitive to parameter configurations. Manual parameter tuning is time-consuming and…

Hardware Architecture · Computer Science 2026-04-01 Guangyu Hu , Chen Chen , Xiaofeng Zhou , Jiaxi Zhang , Wei Zhang , Hongce Zhang

We advocate a numerically reliable and accurate approach for practical parameter identifiability analysis: Applying column subset selection (CSS) to the sensitivity matrix, instead of computing an eigenvalue decomposition of the Fischer…

Numerical Analysis · Mathematics 2022-05-10 Katherine J. Pearce , Ilse C. F. Ipsen , Mansoor A. Haider , Arvind K. Saibaba , Ralph C. Smith

Conventionally, high-throughput computational materials searches start from an input set of bulk compounds extracted from material databases, and this set is screened for candidate materials for specific applications. In contrast, many…

Materials Science · Physics 2023-04-11 Rachel Woods-Robinson , Matthew K. Horton , Kristin A. Persson

The use of Hodgkin-Huxley (HH) equations abounds in the literature, but the identifiability of the HH model parameters has not been broadly considered. Identifiability analysis addresses the question of whether it is possible to estimate…

Neurons and Cognition · Quantitative Biology 2015-11-18 Olivia J. Walch , Marisa C. Eisenberg

An efficient structural identifiability analysis algorithm is developed in this study for a broad range of network structures. The proposed method adopts the Wright's path coefficient method to generate identifiability equations in forms of…

Molecular Networks · Quantitative Biology 2017-08-25 Yulin Wang , Na Lu , Hongyu Miao

Identifying tire and vehicle parameters is an essential step in designing control and planning algorithms for autonomous vehicles. This paper proposes a new method: Simulation-Based Inference (SBI), a modern interpretation of Approximate…

Robotics · Computer Science 2021-08-30 Ali Boyali , Simon Thompson , David Robert Wong

The article considers parameter estimation constructing such as quasi-maximum likelyhood estimation and one step estimation in statistical models generated by solution of stochastic differential equation. It has been developed a software…

Statistics Theory · Mathematics 2021-03-12 Dmytro Ivanenko , Rostyslav Pogorielov